PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F5H/CYP84A
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Gene Pathway Family Confidence Status
ocimum_basilicum_1003.g1.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_1102.g6.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_1259.g1.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_1292.g49.t1 Phenylpropanoid F5H/CYP84A low borderline
ocimum_basilicum_1538.g4.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_1945.g15.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_1945.g38.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_1950.g62.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_1950.g64.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_1950.g76.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_1958.g18.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_1980.g51.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_338905.g1.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_360142.g2.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_360852.g1.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_360863.g3.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_363632.g3.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_366412.g1.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_374927.g1.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_375154.g9.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_376328.g8.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_376503.g6.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_378015.g3.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_379193.g2.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_380191.g33.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_380227.g26.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_380748.g9.t1 Phenylpropanoid F5H/CYP84A medium pass
ocimum_basilicum_381419.g18.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_381419.g25.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_381419.g26.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_381419.g30.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_381419.g31.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_381828.g43.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_382181.g69.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_382462.g20.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_382614.g9.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_383013.g50.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_383013.g73.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_383013.g77.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_383013.g79.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_383013.g80.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_383013.g9.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_383210.g2.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_383238.g31.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_383292.g23.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_383458.g4.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_383458.g6.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_383520.g5.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_383639.g50.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_383641.g12.t1 Phenylpropanoid F5H/CYP84A medium borderline