PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
ocimum_basilicum_1095.g2.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_1264.g4.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_1275.g12.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_1432.g16.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_1511.g17.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_1511.g18.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_1583.g51.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_1737.g8.t1 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_1791.g33.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_1842.g13.t1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
ocimum_basilicum_1952.g74.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_1953.g130.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_1953.g131.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_1953.g28.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_1953.g29.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_1953.g32.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_1953.g33.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_1953.g34.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_1953.g35.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_1953.g36.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_1953.g37.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_1962.g10.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_308.g237.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_332814.g1.t1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
ocimum_basilicum_337292.g1.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_343930.g1.t1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
ocimum_basilicum_350311.g5.t1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
ocimum_basilicum_361128.g1.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_363936.g1.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_367684.g1.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_369723.g1.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_370691.g2.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_371387.g2.t1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
ocimum_basilicum_371980.g3.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_371980.g4.t1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
ocimum_basilicum_372294.g5.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_375513.g2.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_376002.g8.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_376576.g5.t1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_376710.g9.t1 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_378078.g2.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_378188.g3.t1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
ocimum_basilicum_378354.g7.t1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_378581.g3.t1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
ocimum_basilicum_378949.g31.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_378949.g32.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_378949.g33.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_379493.g1.t1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
ocimum_basilicum_381140.g3.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_381167.g16.t1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH