PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
ocimum_basilicum_1050.g32.t1 Alkaloid GS high pass
ocimum_basilicum_1050.g33.t1 Alkaloid GS low borderline
ocimum_basilicum_1050.g36.t1 Alkaloid GS high pass
ocimum_basilicum_1151.g5.t1 Alkaloid GS medium pass
ocimum_basilicum_1359.g21.t1 Alkaloid GS high pass
ocimum_basilicum_1503.g10.t1 Alkaloid GS high pass
ocimum_basilicum_1503.g11.t1 Alkaloid GS medium pass
ocimum_basilicum_1703.g3.t1 Alkaloid GS medium pass
ocimum_basilicum_1863.g19.t1 Alkaloid GS low borderline
ocimum_basilicum_1869.g67.t1 Alkaloid GS low borderline
ocimum_basilicum_1869.g70.t1 Alkaloid GS low borderline
ocimum_basilicum_1908.g34.t1 Alkaloid GS low borderline
ocimum_basilicum_1908.g35.t1 Alkaloid GS low borderline
ocimum_basilicum_1979.g8.t1 Alkaloid GS medium pass
ocimum_basilicum_308.g15.t1 Alkaloid GS medium pass
ocimum_basilicum_348204.g1.t1 Alkaloid GS high pass
ocimum_basilicum_355163.g2.t1 Alkaloid GS high pass
ocimum_basilicum_355163.g3.t1 Alkaloid GS medium pass
ocimum_basilicum_365528.g1.t1 Alkaloid GS high pass
ocimum_basilicum_366410.g1.t1 Alkaloid GS low borderline
ocimum_basilicum_373918.g10.t1 Alkaloid GS high pass
ocimum_basilicum_373918.g8.t1 Alkaloid GS medium pass
ocimum_basilicum_373918.g9.t1 Alkaloid GS high pass
ocimum_basilicum_374.g44.t1 Alkaloid GS high pass
ocimum_basilicum_374.g45.t1 Alkaloid GS high pass
ocimum_basilicum_376199.g1.t1 Alkaloid GS low borderline
ocimum_basilicum_376557.g1.t1 Alkaloid GS medium pass
ocimum_basilicum_381014.g13.t1 Alkaloid GS high pass
ocimum_basilicum_381014.g14.t1 Alkaloid GS high pass
ocimum_basilicum_381014.g15.t1 Alkaloid GS high pass
ocimum_basilicum_381291.g3.t1 Alkaloid GS medium pass
ocimum_basilicum_381385.g13.t1 Alkaloid GS low borderline
ocimum_basilicum_381720.g25.t1 Alkaloid GS low borderline
ocimum_basilicum_382873.g11.t1 Alkaloid GS medium pass
ocimum_basilicum_382987.g5.t1 Alkaloid GS low borderline
ocimum_basilicum_382987.g6.t1 Alkaloid GS low borderline
ocimum_basilicum_383079.g13.t1 Alkaloid GS low borderline
ocimum_basilicum_383079.g19.t1 Alkaloid GS low borderline
ocimum_basilicum_383079.g22.t1 Alkaloid GS low borderline
ocimum_basilicum_383079.g29.t1 Alkaloid GS low borderline
ocimum_basilicum_383079.g31.t1 Alkaloid GS low borderline
ocimum_basilicum_383079.g37.t1 Alkaloid GS low borderline
ocimum_basilicum_383166.g37.t1 Alkaloid GS low borderline
ocimum_basilicum_383254.g58.t1 Alkaloid GS medium pass
ocimum_basilicum_383503.g51.t1 Alkaloid GS high pass
ocimum_basilicum_383527.g51.t1 Alkaloid GS low borderline
ocimum_basilicum_383976.g2.t1 Alkaloid GS low borderline
ocimum_basilicum_383976.g3.t1 Alkaloid GS low borderline
ocimum_basilicum_384083.g2.t1 Alkaloid GS medium pass
ocimum_basilicum_384093.g14.t1 Alkaloid GS low borderline