PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Gene Pathway Family Confidence Status Best Target
ocimum_basilicum_1235.g1.t1 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
ocimum_basilicum_1522.g17.t1 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
ocimum_basilicum_1522.g18.t1 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
ocimum_basilicum_1522.g2.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_1791.g34.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_1791.g35.t1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
ocimum_basilicum_1952.g78.t1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
ocimum_basilicum_1952.g79.t1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
ocimum_basilicum_308.g154.t1 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
ocimum_basilicum_308.g155.t1 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
ocimum_basilicum_308.g156.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_308.g157.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_308.g160.t1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
ocimum_basilicum_308.g161.t1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
ocimum_basilicum_308.g162.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_308.g163.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_308.g164.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_308.g165.t1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
ocimum_basilicum_308.g166.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_351593.g2.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_364242.g1.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_371693.g2.t1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
ocimum_basilicum_374.g141.t1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
ocimum_basilicum_374.g142.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_375676.g1.t1 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
ocimum_basilicum_381782.g1.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_381782.g10.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_381782.g11.t1 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
ocimum_basilicum_381782.g4.t1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
ocimum_basilicum_381782.g7.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_381782.g9.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_381872.g2.t1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
ocimum_basilicum_381872.g5.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_382917.g39.t1 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
ocimum_basilicum_382917.g41.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_382917.g43.t1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
ocimum_basilicum_382917.g44.t1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
ocimum_basilicum_382928.g4.t1 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
ocimum_basilicum_382966.g10.t1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
ocimum_basilicum_382966.g11.t1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
ocimum_basilicum_383528.g118.t1 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
ocimum_basilicum_383641.g92.t1 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
ocimum_basilicum_384868.g48.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_384932.g74.t1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
ocimum_basilicum_385189.g7.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_385750.g10.t1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
ocimum_basilicum_385750.g11.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_385750.g12.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
ocimum_basilicum_385750.g13.t1 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
ocimum_basilicum_385750.g14.t1 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH