PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
ocimum_basilicum_1003.g1.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_1179.g14.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_1179.g16.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_1408.g2.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_1408.g3.t1 Alkaloid G8O/G8H medium pass
ocimum_basilicum_1551.g113.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_1551.g115.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_1560.g90.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_1593.g21.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_1846.g1.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_1863.g38.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_1874.g35.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_1950.g53.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_1958.g18.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_1958.g19.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_1973.g25.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_1973.g49.t1 Alkaloid G8O/G8H medium pass
ocimum_basilicum_1975.g182.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_1984.g19.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_302767.g1.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_302837.g2.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_354132.g1.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_360142.g2.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_364613.g2.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_364722.g4.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_369090.g2.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_371956.g2.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_372329.g1.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_374927.g1.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_375493.g3.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_375493.g5.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_376447.g1.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_376503.g2.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_378015.g5.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_378015.g7.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_378681.g8.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_378949.g20.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_379021.g10.t1 Alkaloid G8O/G8H medium pass
ocimum_basilicum_379021.g5.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_379501.g19.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_379501.g3.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_379741.g4.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_379741.g5.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_379904.g1.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_380515.g8.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_381232.g2.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_381297.g2.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_381334.g6.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_381364.g8.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_381419.g20.t1 Alkaloid G8O/G8H medium borderline