PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPR
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Gene Pathway Family Confidence Status Best Target
ocimum_basilicum_1125.g23.t1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
ocimum_basilicum_1158.g3.t1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
ocimum_basilicum_1545.g2.t1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
ocimum_basilicum_369104.g3.t1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
ocimum_basilicum_370848.g3.t1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
ocimum_basilicum_373320.g1.t1 Rosmarinic Acid CPR low borderline CPR__00009__sp_Q9SUM3_NCPR2_ARATH
ocimum_basilicum_380370.g8.t1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
ocimum_basilicum_380517.g40.t1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
ocimum_basilicum_381783.g2.t1 Rosmarinic Acid CPR medium pass CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
ocimum_basilicum_382592.g2.t1 Rosmarinic Acid CPR medium pass CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
ocimum_basilicum_383105.g43.t1 Rosmarinic Acid CPR medium pass CPR__00002__sp_A0A7T9QPQ1_CPR_PIPNI
ocimum_basilicum_383238.g16.t1 Rosmarinic Acid CPR medium pass CPR__00002__sp_A0A7T9QPQ1_CPR_PIPNI
ocimum_basilicum_384260.g50.t1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
ocimum_basilicum_384260.g61.t1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
ocimum_basilicum_384807.g14.t1 Rosmarinic Acid CPR medium pass CPR__00002__sp_A0A7T9QPQ1_CPR_PIPNI
ocimum_basilicum_384900.g18.t1 Rosmarinic Acid CPR low borderline CPR__00002__sp_A0A7T9QPQ1_CPR_PIPNI
ocimum_basilicum_385000.g8.t1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
ocimum_basilicum_385149.g75.t1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
ocimum_basilicum_447.g30.t1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
ocimum_basilicum_448.g147.t1 Rosmarinic Acid CPR medium pass CPR__00002__sp_A0A7T9QPQ1_CPR_PIPNI
ocimum_basilicum_485.g19.t1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
ocimum_basilicum_562.g38.t1 Rosmarinic Acid CPR medium pass CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
ocimum_basilicum_971.g9.t1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI