PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
ocimum_basilicum_753.g18.t1 Alkaloid 16OMT medium borderline
ocimum_basilicum_925.g55.t1 Alkaloid 16OMT medium borderline
ocimum_basilicum_935.g31.t1 Alkaloid 16OMT medium pass
ocimum_basilicum_1196.g6.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_1953.g43.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_1953.g53.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_1957.g72.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_337233.g3.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_366967.g1.t1 Alkaloid 6OMT_4OMT_SOMT medium pass
ocimum_basilicum_378681.g2.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_378949.g11.t1 Alkaloid 6OMT_4OMT_SOMT medium pass
ocimum_basilicum_378949.g5.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_378949.g9.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_383141.g12.t1 Alkaloid 6OMT_4OMT_SOMT low borderline
ocimum_basilicum_383864.g75.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_384473.g61.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_384473.g62.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_384473.g64.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_385016.g15.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_385816.g3.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_385816.g5.t1 Alkaloid 6OMT_4OMT_SOMT medium pass
ocimum_basilicum_451.g81.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_519.g79.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_519.g80.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_519.g81.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_686.g44.t1 Alkaloid 6OMT_4OMT_SOMT medium pass
ocimum_basilicum_686.g45.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_703.g16.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_703.g17.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_703.g5.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_703.g9.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline
ocimum_basilicum_1079.g4.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_1081.g79.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_1081.g82.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_1081.g83.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_1154.g11.t1 Alkaloid 7DLGT high pass
ocimum_basilicum_1188.g5.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_1188.g6.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_1252.g3.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_1252.g4.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_1295.g16.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_1340.g4.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_1434.g31.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_1437.g13.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_1523.g39.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_1523.g45.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_1568.g137.t1 Alkaloid 7DLGT high pass
ocimum_basilicum_1574.g20.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_1574.g72.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_1583.g29.t1 Alkaloid 7DLGT medium pass