PlantSME Plant secondary metabolism enzyme database
PMK

PMK

Atlas summary family PMK.

Lineage Coverage
Detected in 734 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Humulus lupulus
Arachis hypogaea
Arachis monticola
Panax quinquefolius
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1501 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
XP_015868326.1[Ziziphus ziziphus_jujuba XP_015868326.1[Ziziphus
XP_015897316.1[Ziziphus ziziphus_jujuba XP_015897316.1[Ziziphus
Zmar01G0012940.1 zostera_marina Zmar01G0012940.1
Zmar05G0009650.1 zostera_marina Zmar05G0009650.1
ZjapZjn_sc00002.10022360 zoysia_japonica ZjapZjn_sc00002.10022360
ZjapZjn_sc00003.10038650 zoysia_japonica ZjapZjn_sc00003.10038650
ZjapZjn_sc00144.10514930 zoysia_japonica ZjapZjn_sc00144.10514930
ZjapZjn_sc00674.10553580 zoysia_japonica ZjapZjn_sc00674.10553580
zoysia_matrella_Zmw_sc00437.1.g00010.1.am.mkhc zoysia_matrella zoysia_matrella_Zmw_sc00437.1.g00010.1.am.mkhc
zoysia_matrella_Zmw_sc01674.1.g00060.1.am.mkhc zoysia_matrella zoysia_matrella_Zmw_sc01674.1.g00060.1.am.mkhc
zoysia_matrella_Zmw_sc01766.1.g00140.1.sm.mkhc zoysia_matrella zoysia_matrella_Zmw_sc01766.1.g00140.1.sm.mkhc
zoysia_matrella_Zmw_sc03037.1.g00060.1.sm.mkhc zoysia_matrella zoysia_matrella_Zmw_sc03037.1.g00060.1.sm.mkhc
zoysia_matrella_Zmw_sc03099.1.g00050.1.sm.mkhc zoysia_matrella zoysia_matrella_Zmw_sc03099.1.g00050.1.sm.mkhc
zoysia_matrella_Zmw_sc03373.1.g00060.1.am.mkhc zoysia_matrella zoysia_matrella_Zmw_sc03373.1.g00060.1.am.mkhc
ZPZ_r1.0_Zpz_sc00316.1.g00450.1.sm.mkhc zoysia_pacifica ZPZ_r1.0_Zpz_sc00316.1.g00450.1.sm.mkhc
ZPZ_r1.0_Zpz_sc02315.1.g00060.1.am.mkhc zoysia_pacifica ZPZ_r1.0_Zpz_sc02315.1.g00060.1.am.mkhc
ZPZ_r1.0_Zpz_sc02350.1.g00020.1.am.mkhc zoysia_pacifica ZPZ_r1.0_Zpz_sc02350.1.g00020.1.am.mkhc
ZPZ_r1.0_Zpz_sc02510.1.g00070.1.sm.mkhc zoysia_pacifica ZPZ_r1.0_Zpz_sc02510.1.g00070.1.sm.mkhc
XP_027343036.1 abrus_precatorius XP_027343036.1
AagrBONNSc2ySwM_344G0029670 anthoceros_agrestis_bonn AagrBONNSc2ySwM_344G0029670
AVESA.00010b.r1.5CG0913740.1 avena_sativa AVESA.00010b.r1.5CG0913740.1
Cglascaffold840244100 casuarina_glauca Cglascaffold840244100
cinchona_pubescens_g45866.t1 cinchona_pubescens cinchona_pubescens_g45866.t1
genome_Dca35216.1 dianthus_caryophyllus genome_Dca35216.1
gossypium_bickii_Gbic_06G014950.1 gossypium_bickii gossypium_bickii_Gbic_06G014950.1
gossypium_longicalyx_Glon_02G012120.1 gossypium_longicalyx gossypium_longicalyx_Glon_02G012120.1
gossypium_longicalyx_Glon_05G010970.1 gossypium_longicalyx gossypium_longicalyx_Glon_05G010970.1
gossypium_longicalyx_Glon_10G014650.1 gossypium_longicalyx gossypium_longicalyx_Glon_10G014650.1
gossypium_longicalyx_Glon_11G027420.1 gossypium_longicalyx gossypium_longicalyx_Glon_11G027420.1
gossypium_rotundifolium_Grot_06G014950.1 gossypium_rotundifolium gossypium_rotundifolium_Grot_06G014950.1