PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
genome_Dca11125.1 Alkaloid 16OMT medium borderline
genome_Dca14878.1 Alkaloid 16OMT medium borderline
genome_Dca14882.1 Alkaloid 16OMT medium borderline
genome_Dca14884.1 Alkaloid 16OMT medium borderline
genome_Dca16411.1 Alkaloid 16OMT medium borderline
genome_Dca19315.1 Alkaloid 16OMT low borderline
genome_Dca24344.1 Alkaloid 16OMT medium borderline
genome_Dca30112.1 Alkaloid 16OMT medium borderline
genome_Dca35026.1 Alkaloid 16OMT medium borderline
genome_Dca35601.1 Alkaloid 16OMT medium borderline
genome_Dca35603.1 Alkaloid 16OMT medium borderline
genome_Dca35856.1 Alkaloid 16OMT medium borderline
genome_Dca35859.1 Alkaloid 16OMT medium borderline
genome_Dca36604.1 Alkaloid 16OMT medium borderline
genome_Dca39955.1 Alkaloid 16OMT medium borderline
genome_Dca43027.1 Alkaloid 16OMT medium borderline
genome_Dca43028.1 Alkaloid 16OMT medium borderline
genome_Dca44913.1 Alkaloid 16OMT medium borderline
genome_Dca47414.1 Alkaloid 16OMT low borderline
genome_Dca48560.1 Alkaloid 16OMT medium borderline
genome_Dca49999.1 Alkaloid 16OMT low borderline
genome_Dca52274.1 Alkaloid 16OMT medium borderline
genome_Dca52627.1 Alkaloid 16OMT medium borderline
genome_Dca57667.1 Alkaloid 16OMT medium borderline
genome_Dca58066.1 Alkaloid 16OMT medium borderline
genome_Dca6143.1 Alkaloid 16OMT medium borderline
genome_Dca7944.1 Alkaloid 16OMT low borderline
genome_Dca9134.1 Alkaloid 16OMT medium borderline
genome_Dca1079.1 Alkaloid 6OMT_4OMT_SOMT low borderline
genome_Dca10392.1 Alkaloid 7DLGT low borderline
genome_Dca11189.1 Alkaloid 7DLGT medium pass
genome_Dca11914.1 Alkaloid 7DLGT medium pass
genome_Dca11919.1 Alkaloid 7DLGT medium pass
genome_Dca11979.1 Alkaloid 7DLGT medium pass
genome_Dca13727.1 Alkaloid 7DLGT low borderline
genome_Dca14000.1 Alkaloid 7DLGT low borderline
genome_Dca14546.1 Alkaloid 7DLGT low borderline
genome_Dca17573.1 Alkaloid 7DLGT low borderline
genome_Dca17593.1 Alkaloid 7DLGT medium pass
genome_Dca17594.1 Alkaloid 7DLGT high pass
genome_Dca17928.1 Alkaloid 7DLGT low borderline
genome_Dca17948.1 Alkaloid 7DLGT high pass
genome_Dca17949.1 Alkaloid 7DLGT medium pass
genome_Dca17950.1 Alkaloid 7DLGT high pass
genome_Dca17951.1 Alkaloid 7DLGT medium pass
genome_Dca17952.1 Alkaloid 7DLGT high pass
genome_Dca18626.1 Alkaloid 7DLGT high pass
genome_Dca18846.1 Alkaloid 7DLGT low borderline
genome_Dca19778.1 Alkaloid 7DLGT medium pass
genome_Dca20983.1 Alkaloid 7DLGT medium pass