PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 8HGO
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Gene Pathway Family Confidence Status
genome_Dca10488.1 Alkaloid 8HGO medium pass
genome_Dca17211.1 Alkaloid 8HGO medium pass
genome_Dca17484.1 Alkaloid 8HGO low borderline
genome_Dca18670.1 Alkaloid 8HGO medium borderline
genome_Dca18671.1 Alkaloid 8HGO medium borderline
genome_Dca28427.1 Alkaloid 8HGO medium borderline
genome_Dca29066.1 Alkaloid 8HGO low borderline
genome_Dca34126.1 Alkaloid 8HGO medium borderline
genome_Dca35493.1 Alkaloid 8HGO medium pass
genome_Dca39410.1 Alkaloid 8HGO low borderline
genome_Dca39591.1 Alkaloid 8HGO low borderline
genome_Dca42956.1 Alkaloid 8HGO medium borderline
genome_Dca42957.1 Alkaloid 8HGO medium borderline
genome_Dca42958.1 Alkaloid 8HGO medium borderline
genome_Dca45923.1 Alkaloid 8HGO medium pass
genome_Dca49843.1 Alkaloid 8HGO medium borderline
genome_Dca49844.1 Alkaloid 8HGO medium borderline
genome_Dca49845.1 Alkaloid 8HGO medium borderline
genome_Dca55610.1 Alkaloid 8HGO medium borderline
genome_Dca56496.1 Alkaloid 8HGO medium borderline
genome_Dca56520.1 Alkaloid 8HGO medium borderline
genome_Dca56591.1 Alkaloid 8HGO low borderline
genome_Dca57844.1 Alkaloid 8HGO medium borderline
genome_Dca6861.1 Alkaloid 8HGO low borderline
genome_Dca9035.1 Alkaloid 8HGO low borderline