PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
genome_Dca17292.1 Alkaloid PMT low borderline
genome_Dca26576.1 Alkaloid PMT medium borderline
genome_Dca26673.1 Alkaloid PMT medium borderline
genome_Dca32387.1 Alkaloid PMT medium pass
genome_Dca32388.1 Alkaloid PMT medium pass
genome_Dca35196.1 Alkaloid PMT medium borderline
genome_Dca39998.1 Alkaloid PMT medium borderline
genome_Dca41229.1 Alkaloid PMT medium pass
genome_Dca41408.1 Alkaloid PMT low borderline
genome_Dca42815.1 Alkaloid PMT low borderline
genome_Dca43723.1 Alkaloid PMT medium pass
genome_Dca43724.1 Alkaloid PMT medium pass
genome_Dca43726.1 Alkaloid PMT medium pass
genome_Dca43727.1 Alkaloid PMT medium pass
genome_Dca4546.1 Alkaloid PMT medium borderline
genome_Dca48099.1 Alkaloid PMT medium borderline
genome_Dca50416.1 Alkaloid PMT low borderline
genome_Dca51864.1 Alkaloid PMT medium borderline
genome_Dca52625.1 Alkaloid PMT low borderline
genome_Dca52779.1 Alkaloid PMT low borderline
genome_Dca53597.1 Alkaloid PMT low borderline
genome_Dca56525.1 Alkaloid PMT medium borderline
genome_Dca56526.1 Alkaloid PMT medium borderline
genome_Dca5668.1 Alkaloid PMT low borderline
genome_Dca61942.1 Alkaloid PMT medium pass
genome_Dca7129.1 Alkaloid PMT medium pass
genome_Dca7130.1 Alkaloid PMT medium pass
genome_Dca7133.1 Alkaloid PMT medium pass
genome_Dca9198.1 Alkaloid PMT low borderline