PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
genome_Dca106.1 Flavonoid F3H low borderline
genome_Dca11175.1 Flavonoid F3H medium borderline
genome_Dca12008.1 Flavonoid F3H medium borderline
genome_Dca127.1 Flavonoid F3H medium borderline
genome_Dca13496.1 Flavonoid F3H medium borderline
genome_Dca137.1 Flavonoid F3H medium borderline
genome_Dca15455.1 Flavonoid F3H low borderline
genome_Dca15769.1 Flavonoid F3H medium borderline
genome_Dca15770.1 Flavonoid F3H medium borderline
genome_Dca15944.1 Flavonoid F3H low borderline
genome_Dca16994.1 Flavonoid F3H medium borderline
genome_Dca1746.1 Flavonoid F3H medium borderline
genome_Dca18822.1 Flavonoid F3H medium borderline
genome_Dca19152.1 Flavonoid F3H medium borderline
genome_Dca19153.1 Flavonoid F3H medium borderline
genome_Dca19154.1 Flavonoid F3H medium borderline
genome_Dca19155.1 Flavonoid F3H medium borderline
genome_Dca19156.1 Flavonoid F3H medium pass
genome_Dca19461.1 Flavonoid F3H medium borderline
genome_Dca19464.1 Flavonoid F3H medium borderline
genome_Dca19465.1 Flavonoid F3H medium pass
genome_Dca19466.1 Flavonoid F3H medium borderline
genome_Dca19467.1 Flavonoid F3H medium borderline
genome_Dca20258.1 Flavonoid F3H medium borderline
genome_Dca20260.1 Flavonoid F3H medium borderline
genome_Dca20720.1 Flavonoid F3H medium borderline
genome_Dca20722.1 Flavonoid F3H medium borderline
genome_Dca21223.1 Flavonoid F3H low borderline
genome_Dca21593.1 Flavonoid F3H medium borderline
genome_Dca21867.1 Flavonoid F3H medium borderline
genome_Dca23006.1 Flavonoid F3H medium borderline
genome_Dca23007.1 Flavonoid F3H medium borderline
genome_Dca23008.1 Flavonoid F3H medium pass
genome_Dca23009.1 Flavonoid F3H medium borderline
genome_Dca23015.1 Flavonoid F3H medium borderline
genome_Dca23371.1 Flavonoid F3H medium borderline
genome_Dca23712.1 Flavonoid F3H low borderline
genome_Dca24085.1 Flavonoid F3H low borderline
genome_Dca25005.1 Flavonoid F3H medium borderline
genome_Dca26206.1 Flavonoid F3H medium borderline
genome_Dca26388.1 Flavonoid F3H medium borderline
genome_Dca26577.1 Flavonoid F3H medium borderline
genome_Dca26804.1 Flavonoid F3H medium borderline
genome_Dca2773.1 Flavonoid F3H medium borderline
genome_Dca2789.1 Flavonoid F3H low borderline
genome_Dca28055.1 Flavonoid F3H low borderline
genome_Dca28056.1 Flavonoid F3H low borderline
genome_Dca28567.1 Flavonoid F3H medium borderline
genome_Dca32915.1 Flavonoid F3H medium borderline
genome_Dca32916.1 Flavonoid F3H medium borderline