PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status
genome_Dca11693.1 Terpenoid TPS medium pass
genome_Dca15600.1 Terpenoid TPS medium pass
genome_Dca16160.1 Terpenoid TPS medium pass
genome_Dca18653.1 Terpenoid TPS medium pass
genome_Dca18654.1 Terpenoid TPS medium pass
genome_Dca18655.1 Terpenoid TPS medium pass
genome_Dca19517.1 Terpenoid TPS medium pass
genome_Dca19518.1 Terpenoid TPS medium pass
genome_Dca19862.1 Terpenoid TPS medium pass
genome_Dca2301.1 Terpenoid TPS medium pass
genome_Dca23179.1 Terpenoid TPS medium pass
genome_Dca29313.1 Terpenoid TPS medium pass
genome_Dca30863.1 Terpenoid TPS medium pass
genome_Dca32881.1 Terpenoid TPS medium pass
genome_Dca34353.1 Terpenoid TPS low borderline
genome_Dca3608.1 Terpenoid TPS medium pass
genome_Dca3609.1 Terpenoid TPS medium pass
genome_Dca36493.1 Terpenoid TPS low borderline
genome_Dca37060.1 Terpenoid TPS low borderline
genome_Dca38959.1 Terpenoid TPS medium pass
genome_Dca39938.1 Terpenoid TPS medium pass
genome_Dca42012.1 Terpenoid TPS medium pass
genome_Dca42408.1 Terpenoid TPS low borderline
genome_Dca45349.1 Terpenoid TPS medium pass
genome_Dca47800.1 Terpenoid TPS medium pass
genome_Dca49377.1 Terpenoid TPS medium pass
genome_Dca50121.1 Terpenoid TPS medium pass
genome_Dca50122.1 Terpenoid TPS medium pass
genome_Dca50123.1 Terpenoid TPS medium pass
genome_Dca50124.1 Terpenoid TPS medium pass
genome_Dca50125.1 Terpenoid TPS low borderline
genome_Dca50126.1 Terpenoid TPS medium pass
genome_Dca50127.1 Terpenoid TPS medium pass
genome_Dca50128.1 Terpenoid TPS medium pass
genome_Dca50129.1 Terpenoid TPS medium pass
genome_Dca50130.1 Terpenoid TPS low borderline
genome_Dca50131.1 Terpenoid TPS medium pass
genome_Dca50132.1 Terpenoid TPS medium pass
genome_Dca51914.1 Terpenoid TPS medium pass
genome_Dca51915.1 Terpenoid TPS medium pass
genome_Dca53748.1 Terpenoid TPS medium pass
genome_Dca54030.1 Terpenoid TPS medium pass
genome_Dca5881.1 Terpenoid TPS medium pass
genome_Dca58923.1 Terpenoid TPS medium pass
genome_Dca6062.1 Terpenoid TPS medium pass