PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
genome_Dca11107.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
genome_Dca12149.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
genome_Dca13524.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
genome_Dca14505.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
genome_Dca14613.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
genome_Dca14867.1 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
genome_Dca15989.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
genome_Dca16671.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
genome_Dca21609.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
genome_Dca24950.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
genome_Dca25549.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
genome_Dca26737.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
genome_Dca26902.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
genome_Dca2815.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
genome_Dca31.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
genome_Dca32144.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
genome_Dca34072.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
genome_Dca37875.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
genome_Dca39643.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
genome_Dca40226.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
genome_Dca4107.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
genome_Dca43591.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
genome_Dca4444.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
genome_Dca44537.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
genome_Dca51232.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
genome_Dca52777.1 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
genome_Dca55016.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
genome_Dca56239.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
genome_Dca5719.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
genome_Dca58670.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
genome_Dca59709.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
genome_Dca61378.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
genome_Dca768.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
genome_Dca8177.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH