PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
genome_Dca13226.1 Terpenoid AACT medium borderline
genome_Dca22877.1 Terpenoid AACT medium borderline
genome_Dca24550.1 Terpenoid AACT medium borderline
genome_Dca28116.1 Terpenoid AACT medium borderline
genome_Dca48605.1 Terpenoid AACT low borderline
genome_Dca53459.1 Terpenoid AACT medium borderline
genome_Dca60744.1 Terpenoid AACT low borderline
genome_Dca10121.1 Terpenoid BAHD medium pass
genome_Dca10122.1 Terpenoid BAHD medium pass
genome_Dca10306.1 Terpenoid BAHD medium pass
genome_Dca10307.1 Terpenoid BAHD medium pass
genome_Dca10308.1 Terpenoid BAHD medium pass
genome_Dca10430.1 Terpenoid BAHD medium pass
genome_Dca11007.1 Terpenoid BAHD medium pass
genome_Dca11091.1 Terpenoid BAHD medium pass
genome_Dca11213.1 Terpenoid BAHD low borderline
genome_Dca11653.1 Terpenoid BAHD low borderline
genome_Dca11671.1 Terpenoid BAHD low borderline
genome_Dca11695.1 Terpenoid BAHD low borderline
genome_Dca12108.1 Terpenoid BAHD medium pass
genome_Dca12141.1 Terpenoid BAHD low borderline
genome_Dca12443.1 Terpenoid BAHD medium pass
genome_Dca12708.1 Terpenoid BAHD medium pass
genome_Dca13277.1 Terpenoid BAHD medium pass
genome_Dca1372.1 Terpenoid BAHD medium pass
genome_Dca14536.1 Terpenoid BAHD medium pass
genome_Dca14628.1 Terpenoid BAHD medium pass
genome_Dca15121.1 Terpenoid BAHD low borderline
genome_Dca1584.1 Terpenoid BAHD medium pass
genome_Dca15900.1 Terpenoid BAHD medium pass
genome_Dca16232.1 Terpenoid BAHD medium pass
genome_Dca16860.1 Terpenoid BAHD medium pass
genome_Dca17065.1 Terpenoid BAHD medium pass
genome_Dca17453.1 Terpenoid BAHD medium pass
genome_Dca18153.1 Terpenoid BAHD medium pass
genome_Dca18693.1 Terpenoid BAHD low borderline
genome_Dca18695.1 Terpenoid BAHD low borderline
genome_Dca18800.1 Terpenoid BAHD medium pass
genome_Dca18823.1 Terpenoid BAHD medium pass
genome_Dca19127.1 Terpenoid BAHD medium pass
genome_Dca19160.1 Terpenoid BAHD medium pass
genome_Dca19204.1 Terpenoid BAHD low borderline
genome_Dca19559.1 Terpenoid BAHD medium pass
genome_Dca19667.1 Terpenoid BAHD medium pass
genome_Dca19675.1 Terpenoid BAHD medium pass
genome_Dca19760.1 Terpenoid BAHD medium pass
genome_Dca19795.1 Terpenoid BAHD medium pass
genome_Dca19810.1 Terpenoid BAHD medium pass
genome_Dca19865.1 Terpenoid BAHD medium pass
genome_Dca20628.1 Terpenoid BAHD medium pass