PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
genome_Dca1073.1 Alkaloid T16H medium borderline
genome_Dca12289.1 Alkaloid T16H medium borderline
genome_Dca12309.1 Alkaloid T16H medium borderline
genome_Dca12310.1 Alkaloid T16H medium borderline
genome_Dca12311.1 Alkaloid T16H medium borderline
genome_Dca12314.1 Alkaloid T16H medium borderline
genome_Dca13127.1 Alkaloid T16H low borderline
genome_Dca16553.1 Alkaloid T16H medium borderline
genome_Dca19799.1 Alkaloid T16H low borderline
genome_Dca19801.1 Alkaloid T16H medium borderline
genome_Dca19802.1 Alkaloid T16H low borderline
genome_Dca23025.1 Alkaloid T16H medium borderline
genome_Dca23615.1 Alkaloid T16H medium borderline
genome_Dca27122.1 Alkaloid T16H medium pass
genome_Dca30442.1 Alkaloid T16H medium borderline
genome_Dca32602.1 Alkaloid T16H medium borderline
genome_Dca32605.1 Alkaloid T16H medium borderline
genome_Dca32661.1 Alkaloid T16H medium borderline
genome_Dca34094.1 Alkaloid T16H low borderline
genome_Dca35404.1 Alkaloid T16H medium borderline
genome_Dca41451.1 Alkaloid T16H medium borderline
genome_Dca42344.1 Alkaloid T16H medium borderline
genome_Dca42415.1 Alkaloid T16H medium borderline
genome_Dca42748.1 Alkaloid T16H medium borderline
genome_Dca45635.1 Alkaloid T16H low borderline
genome_Dca46954.1 Alkaloid T16H low borderline
genome_Dca4951.1 Alkaloid T16H medium borderline
genome_Dca53918.1 Alkaloid T16H medium borderline
genome_Dca53919.1 Alkaloid T16H medium borderline
genome_Dca53924.1 Alkaloid T16H medium borderline
genome_Dca55078.1 Alkaloid T16H medium borderline
genome_Dca56416.1 Alkaloid T16H medium borderline
genome_Dca56678.1 Alkaloid T16H medium borderline
genome_Dca57616.1 Alkaloid T16H medium borderline
genome_Dca58308.1 Alkaloid T16H medium borderline
genome_Dca59089.1 Alkaloid T16H medium borderline
genome_Dca59110.1 Alkaloid T16H medium borderline