PlantSME Plant secondary metabolism enzyme database
SGD

SGD

Atlas summary family SGD.

Lineage Coverage
Detected in 766 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Hordeum vulgare
Aegilops tauschii
Triticum turgidum
Prunus fruticosa
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 25978 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Alyrscaffold_70267970.1 arabidopsis_lyrata Alyrscaffold_70267970.1
Alyrscaffold_80279910.1 arabidopsis_lyrata Alyrscaffold_80279910.1
Alyrscaffold_80284990.1 arabidopsis_lyrata Alyrscaffold_80284990.1
Alyrscaffold_80293030.1 arabidopsis_lyrata Alyrscaffold_80293030.1
Alyrscaffold_80293080.1 arabidopsis_lyrata Alyrscaffold_80293080.1
Alyrscaffold_80297750.1 arabidopsis_lyrata Alyrscaffold_80297750.1
Alyrscaffold_80305990.1 arabidopsis_lyrata Alyrscaffold_80305990.1
ara_suecica_KAG7536424.1 arabidopsis_suecica ara_suecica_KAG7536424.1
ara_suecica_KAG7537925.1 arabidopsis_suecica ara_suecica_KAG7537925.1
ara_suecica_KAG7537926.1 arabidopsis_suecica ara_suecica_KAG7537926.1
ara_suecica_KAG7538350.1 arabidopsis_suecica ara_suecica_KAG7538350.1
ara_suecica_KAG7539378.1 arabidopsis_suecica ara_suecica_KAG7539378.1
ara_suecica_KAG7545033.1 arabidopsis_suecica ara_suecica_KAG7545033.1
ara_suecica_KAG7545273.1 arabidopsis_suecica ara_suecica_KAG7545273.1
ara_suecica_KAG7545915.1 arabidopsis_suecica ara_suecica_KAG7545915.1
ara_suecica_KAG7545916.1 arabidopsis_suecica ara_suecica_KAG7545916.1
ara_suecica_KAG7546618.1 arabidopsis_suecica ara_suecica_KAG7546618.1
ara_suecica_KAG7546656.1 arabidopsis_suecica ara_suecica_KAG7546656.1
ara_suecica_KAG7548201.1 arabidopsis_suecica ara_suecica_KAG7548201.1
ara_suecica_KAG7555082.1 arabidopsis_suecica ara_suecica_KAG7555082.1
ara_suecica_KAG7555494.1 arabidopsis_suecica ara_suecica_KAG7555494.1
ara_suecica_KAG7555495.1 arabidopsis_suecica ara_suecica_KAG7555495.1
ara_suecica_KAG7555496.1 arabidopsis_suecica ara_suecica_KAG7555496.1
ara_suecica_KAG7555626.1 arabidopsis_suecica ara_suecica_KAG7555626.1
ara_suecica_KAG7556534.1 arabidopsis_suecica ara_suecica_KAG7556534.1
ara_suecica_KAG7556537.1 arabidopsis_suecica ara_suecica_KAG7556537.1
ara_suecica_KAG7556538.1 arabidopsis_suecica ara_suecica_KAG7556538.1
ara_suecica_KAG7564446.1 arabidopsis_suecica ara_suecica_KAG7564446.1
ara_suecica_KAG7565080.1 arabidopsis_suecica ara_suecica_KAG7565080.1
ara_suecica_KAG7565856.1 arabidopsis_suecica ara_suecica_KAG7565856.1