PlantSME Plant secondary metabolism enzyme database
SGD

SGD

Atlas summary family SGD.

Lineage Coverage
Detected in 766 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Hordeum vulgare
Aegilops tauschii
Triticum turgidum
Prunus fruticosa
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 25978 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Bhis12G0009110.1 benincasa_hispida Bhis12G0009110.1
Bhis12G0017490.1 benincasa_hispida Bhis12G0017490.1
Bpatpat_scaffold10750033440.1 beta_patula Bpatpat_scaffold10750033440.1
Bpatpat_scaffold110035880.1 beta_patula Bpatpat_scaffold110035880.1
Bpatpat_scaffold110036180.1 beta_patula Bpatpat_scaffold110036180.1
Bpatpat_scaffold11250039480.1 beta_patula Bpatpat_scaffold11250039480.1
Bpatpat_scaffold130680056080.1 beta_patula Bpatpat_scaffold130680056080.1
Bpatpat_scaffold14550067440.1 beta_patula Bpatpat_scaffold14550067440.1
Bpatpat_scaffold16800086030.1 beta_patula Bpatpat_scaffold16800086030.1
Bpatpat_scaffold19500102830.1 beta_patula Bpatpat_scaffold19500102830.1
Bpatpat_scaffold20100107010.1 beta_patula Bpatpat_scaffold20100107010.1
Bpatpat_scaffold20970112130.1 beta_patula Bpatpat_scaffold20970112130.1
Bpatpat_scaffold2230120810.1 beta_patula Bpatpat_scaffold2230120810.1
Bpatpat_scaffold2230120820.1 beta_patula Bpatpat_scaffold2230120820.1
Bpatpat_scaffold2230120830.1 beta_patula Bpatpat_scaffold2230120830.1
Bpatpat_scaffold2230120840.1 beta_patula Bpatpat_scaffold2230120840.1
Bpatpat_scaffold2230120850.1 beta_patula Bpatpat_scaffold2230120850.1
Bpatpat_scaffold22940126110.1 beta_patula Bpatpat_scaffold22940126110.1
Bpatpat_scaffold33900180230.1 beta_patula Bpatpat_scaffold33900180230.1
Bpatpat_scaffold37630192870.1 beta_patula Bpatpat_scaffold37630192870.1
Bpatpat_scaffold37630192870.2 beta_patula Bpatpat_scaffold37630192870.2
Bpatpat_scaffold38070194220.1 beta_patula Bpatpat_scaffold38070194220.1
Bpatpat_scaffold3850195060.1 beta_patula Bpatpat_scaffold3850195060.1
Bpatpat_scaffold39480197290.1 beta_patula Bpatpat_scaffold39480197290.1
Bpatpat_scaffold42090203670.1 beta_patula Bpatpat_scaffold42090203670.1
Bpatpat_scaffold4470208120.1 beta_patula Bpatpat_scaffold4470208120.1
Bpatpat_scaffold5270220750.1 beta_patula Bpatpat_scaffold5270220750.1
Bpatpat_scaffold5270220760.1 beta_patula Bpatpat_scaffold5270220760.1
Bpatpat_scaffold7500248510.1 beta_patula Bpatpat_scaffold7500248510.1
Bpatpat_scaffold7500248510.2 beta_patula Bpatpat_scaffold7500248510.2