SGD

Atlas summary family SGD.

Lineage Coverage

Detected in 766 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 25978 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
Agluscaffold14907_cov1050068860	alnus_glutinosa	Agluscaffold14907_cov1050068860
Agluscaffold15252_cov1070072120	alnus_glutinosa	Agluscaffold15252_cov1070072120
Agluscaffold17612_cov820095480	alnus_glutinosa	Agluscaffold17612_cov820095480
Agluscaffold19223_cov1070109050	alnus_glutinosa	Agluscaffold19223_cov1070109050
Agluscaffold1975_cov920114300	alnus_glutinosa	Agluscaffold1975_cov920114300
Agluscaffold20334_cov950120800	alnus_glutinosa	Agluscaffold20334_cov950120800
Agluscaffold2189_cov930132950	alnus_glutinosa	Agluscaffold2189_cov930132950
Agluscaffold22407_cov1070136710	alnus_glutinosa	Agluscaffold22407_cov1070136710
Agluscaffold266_cov960162360	alnus_glutinosa	Agluscaffold266_cov960162360
Agluscaffold266_cov960162370	alnus_glutinosa	Agluscaffold266_cov960162370
Agluscaffold266_cov960162380	alnus_glutinosa	Agluscaffold266_cov960162380
Agluscaffold28139_cov1010170240	alnus_glutinosa	Agluscaffold28139_cov1010170240
Agluscaffold3140_cov910188130	alnus_glutinosa	Agluscaffold3140_cov910188130
Agluscaffold34855_cov980208060	alnus_glutinosa	Agluscaffold34855_cov980208060
Agluscaffold34855_cov980208070	alnus_glutinosa	Agluscaffold34855_cov980208070
Agluscaffold3913_cov1050226870	alnus_glutinosa	Agluscaffold3913_cov1050226870
Agluscaffold41135_cov810235330	alnus_glutinosa	Agluscaffold41135_cov810235330
Agluscaffold424438_cov1070246700	alnus_glutinosa	Agluscaffold424438_cov1070246700
Agluscaffold424660_cov1020256850	alnus_glutinosa	Agluscaffold424660_cov1020256850
Agluscaffold424845_cov990263240	alnus_glutinosa	Agluscaffold424845_cov990263240
Agluscaffold424980_cov1030264310	alnus_glutinosa	Agluscaffold424980_cov1030264310
Agluscaffold425968_cov790276570	alnus_glutinosa	Agluscaffold425968_cov790276570
Agluscaffold431_cov930283280	alnus_glutinosa	Agluscaffold431_cov930283280
Agluscaffold44271_cov1110286150	alnus_glutinosa	Agluscaffold44271_cov1110286150
Agluscaffold4744_cov1030300070	alnus_glutinosa	Agluscaffold4744_cov1030300070
Agluscaffold5837_cov910339360	alnus_glutinosa	Agluscaffold5837_cov910339360
Agluscaffold7382_cov1100381000	alnus_glutinosa	Agluscaffold7382_cov1100381000
Agluscaffold78291_cov960392300	alnus_glutinosa	Agluscaffold78291_cov960392300
Agluscaffold7913_cov1060393160	alnus_glutinosa	Agluscaffold7913_cov1060393160
alnus_rubra_ALNRU00007858-RA	alnus_rubra	alnus_rubra_ALNRU00007858-RA