PlantSME Plant secondary metabolism enzyme database
SGD

SGD

Atlas summary family SGD.

Lineage Coverage
Detected in 766 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Hordeum vulgare
Aegilops tauschii
Triticum turgidum
Prunus fruticosa
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 25978 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
alnus_rubra_ALNRU00121167-RA alnus_rubra alnus_rubra_ALNRU00121167-RA
alnus_rubra_ALNRU00125384-RA alnus_rubra alnus_rubra_ALNRU00125384-RA
alnus_rubra_ALNRU00126679-RA alnus_rubra alnus_rubra_ALNRU00126679-RA
alnus_rubra_ALNRU00129499-RA alnus_rubra alnus_rubra_ALNRU00129499-RA
alstonia_scholaris_tjs00430 alstonia_scholaris alstonia_scholaris_tjs00430
alstonia_scholaris_tjs01899 alstonia_scholaris alstonia_scholaris_tjs01899
alstonia_scholaris_tjs01947 alstonia_scholaris alstonia_scholaris_tjs01947
alstonia_scholaris_tjs01948 alstonia_scholaris alstonia_scholaris_tjs01948
alstonia_scholaris_tjs02466 alstonia_scholaris alstonia_scholaris_tjs02466
alstonia_scholaris_tjs02776 alstonia_scholaris alstonia_scholaris_tjs02776
alstonia_scholaris_tjs03297 alstonia_scholaris alstonia_scholaris_tjs03297
alstonia_scholaris_tjs03603 alstonia_scholaris alstonia_scholaris_tjs03603
alstonia_scholaris_tjs05453 alstonia_scholaris alstonia_scholaris_tjs05453
alstonia_scholaris_tjs06200 alstonia_scholaris alstonia_scholaris_tjs06200
alstonia_scholaris_tjs06561 alstonia_scholaris alstonia_scholaris_tjs06561
alstonia_scholaris_tjs06704 alstonia_scholaris alstonia_scholaris_tjs06704
alstonia_scholaris_tjs06842 alstonia_scholaris alstonia_scholaris_tjs06842
alstonia_scholaris_tjs07298 alstonia_scholaris alstonia_scholaris_tjs07298
alstonia_scholaris_tjs07545 alstonia_scholaris alstonia_scholaris_tjs07545
alstonia_scholaris_tjs07936 alstonia_scholaris alstonia_scholaris_tjs07936
alstonia_scholaris_tjs07995 alstonia_scholaris alstonia_scholaris_tjs07995
alstonia_scholaris_tjs08441 alstonia_scholaris alstonia_scholaris_tjs08441
alstonia_scholaris_tjs08535 alstonia_scholaris alstonia_scholaris_tjs08535
alstonia_scholaris_tjs08536 alstonia_scholaris alstonia_scholaris_tjs08536
alstonia_scholaris_tjs08537 alstonia_scholaris alstonia_scholaris_tjs08537
alstonia_scholaris_tjs08538 alstonia_scholaris alstonia_scholaris_tjs08538
alstonia_scholaris_tjs08539 alstonia_scholaris alstonia_scholaris_tjs08539
alstonia_scholaris_tjs09190 alstonia_scholaris alstonia_scholaris_tjs09190
alstonia_scholaris_tjs09351 alstonia_scholaris alstonia_scholaris_tjs09351
alstonia_scholaris_tjs09352 alstonia_scholaris alstonia_scholaris_tjs09352