PlantSME Plant secondary metabolism enzyme database
SGD

SGD

Atlas summary family SGD.

Lineage Coverage
Detected in 766 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Hordeum vulgare
Aegilops tauschii
Triticum turgidum
Prunus fruticosa
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 25978 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
acer_truncatum_Atru.chr10.2170 acer_truncatum acer_truncatum_Atru.chr10.2170
acer_truncatum_Atru.chr11.1658 acer_truncatum acer_truncatum_Atru.chr11.1658
acer_truncatum_Atru.chr11.2375 acer_truncatum acer_truncatum_Atru.chr11.2375
acer_truncatum_Atru.chr11.2679 acer_truncatum acer_truncatum_Atru.chr11.2679
acer_truncatum_Atru.chr11.2680 acer_truncatum acer_truncatum_Atru.chr11.2680
acer_truncatum_Atru.chr11.2681 acer_truncatum acer_truncatum_Atru.chr11.2681
acer_truncatum_Atru.chr11.2682 acer_truncatum acer_truncatum_Atru.chr11.2682
acer_truncatum_Atru.chr11.2683 acer_truncatum acer_truncatum_Atru.chr11.2683
acer_truncatum_Atru.chr11.2684 acer_truncatum acer_truncatum_Atru.chr11.2684
acer_truncatum_Atru.chr12.2140 acer_truncatum acer_truncatum_Atru.chr12.2140
acer_truncatum_Atru.chr12.31 acer_truncatum acer_truncatum_Atru.chr12.31
acer_truncatum_Atru.chr2.2757 acer_truncatum acer_truncatum_Atru.chr2.2757
acer_truncatum_Atru.chr2.3113 acer_truncatum acer_truncatum_Atru.chr2.3113
acer_truncatum_Atru.chr2.3132 acer_truncatum acer_truncatum_Atru.chr2.3132
acer_truncatum_Atru.chr2.3700_Atru.chr2.3701 acer_truncatum acer_truncatum_Atru.chr2.3700_Atru.chr2.3701
acer_truncatum_Atru.chr2.894 acer_truncatum acer_truncatum_Atru.chr2.894
acer_truncatum_Atru.chr3.1009 acer_truncatum acer_truncatum_Atru.chr3.1009
acer_truncatum_Atru.chr3.1375 acer_truncatum acer_truncatum_Atru.chr3.1375
acer_truncatum_Atru.chr3.1388 acer_truncatum acer_truncatum_Atru.chr3.1388
acer_truncatum_Atru.chr3.1572 acer_truncatum acer_truncatum_Atru.chr3.1572
acer_truncatum_Atru.chr3.1591 acer_truncatum acer_truncatum_Atru.chr3.1591
acer_truncatum_Atru.chr3.3339 acer_truncatum acer_truncatum_Atru.chr3.3339
acer_truncatum_Atru.chr3.3407 acer_truncatum acer_truncatum_Atru.chr3.3407
acer_truncatum_Atru.chr3.3416 acer_truncatum acer_truncatum_Atru.chr3.3416
acer_truncatum_Atru.chr3.411 acer_truncatum acer_truncatum_Atru.chr3.411
acer_truncatum_Atru.chr3.4217 acer_truncatum acer_truncatum_Atru.chr3.4217
acer_truncatum_Atru.chr4.1300 acer_truncatum acer_truncatum_Atru.chr4.1300
acer_truncatum_Atru.chr4.3009 acer_truncatum acer_truncatum_Atru.chr4.3009
acer_truncatum_Atru.chr4.3112.1 acer_truncatum acer_truncatum_Atru.chr4.3112.1
acer_truncatum_Atru.chr5.1155 acer_truncatum acer_truncatum_Atru.chr5.1155