PlantSME Plant secondary metabolism enzyme database
SGD

SGD

Atlas summary family SGD.

Lineage Coverage
Detected in 766 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Hordeum vulgare
Aegilops tauschii
Triticum turgidum
Prunus fruticosa
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 25978 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Arupctg000651_np121212120023680 andreaea_rupestris Arupctg000651_np121212120023680
Arupctg000670_np121212120029480 andreaea_rupestris Arupctg000670_np121212120029480
Arupctg000684_np121212120033760 andreaea_rupestris Arupctg000684_np121212120033760
Arupctg000709_np121212120044560 andreaea_rupestris Arupctg000709_np121212120044560
Arupctg000736_np121212120045910 andreaea_rupestris Arupctg000736_np121212120045910
Arupctg000817_np121212120061610 andreaea_rupestris Arupctg000817_np121212120061610
Arupctg000817_np121212120062220 andreaea_rupestris Arupctg000817_np121212120062220
Arupctg000868_np121212120070350 andreaea_rupestris Arupctg000868_np121212120070350
Arupctg000906_np121212120085630 andreaea_rupestris Arupctg000906_np121212120085630
Arupctg001005_np121212120099500 andreaea_rupestris Arupctg001005_np121212120099500
Arupctg001049_np121212120105650 andreaea_rupestris Arupctg001049_np121212120105650
Arupctg001050_np121212120105980 andreaea_rupestris Arupctg001050_np121212120105980
Arupctg001061_np121212120107210 andreaea_rupestris Arupctg001061_np121212120107210
Arupctg001249_np121212120126760 andreaea_rupestris Arupctg001249_np121212120126760
Arupctg001274_np121212120131600 andreaea_rupestris Arupctg001274_np121212120131600
Arupctg001283_np121212120133430 andreaea_rupestris Arupctg001283_np121212120133430
Arupctg001355_np121212120150290 andreaea_rupestris Arupctg001355_np121212120150290
Arupctg001410_np121212120157140 andreaea_rupestris Arupctg001410_np121212120157140
Arupctg001454_np121212120165170 andreaea_rupestris Arupctg001454_np121212120165170
Arupctg001454_np121212120165180 andreaea_rupestris Arupctg001454_np121212120165180
Arupctg001483_np121212120170380 andreaea_rupestris Arupctg001483_np121212120170380
Arupctg001490_np121212120173480 andreaea_rupestris Arupctg001490_np121212120173480
Arupctg001560_np121212120183290 andreaea_rupestris Arupctg001560_np121212120183290
Arupctg001593_np121212120187220 andreaea_rupestris Arupctg001593_np121212120187220
Arupctg001734_np121212120210880 andreaea_rupestris Arupctg001734_np121212120210880
Arupctg001825_np121212120225690 andreaea_rupestris Arupctg001825_np121212120225690
Arupctg001826_np121212120226260 andreaea_rupestris Arupctg001826_np121212120226260
Arupctg001827_np121212120227210 andreaea_rupestris Arupctg001827_np121212120227210
Arupctg001840_np121212120230330 andreaea_rupestris Arupctg001840_np121212120230330
Arupctg001854_np121212120231420 andreaea_rupestris Arupctg001854_np121212120231420