STR

Atlas summary family STR.

Lineage Coverage

Detected in 771 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 16085 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
AMhypScaffold_150092360.1	amaranthus_hypochondriacus	AMhypScaffold_150092360.1
AMhypScaffold_20116440.1	amaranthus_hypochondriacus	AMhypScaffold_20116440.1
AMhypScaffold_20117390.1	amaranthus_hypochondriacus	AMhypScaffold_20117390.1
AMhypScaffold_30135000.1	amaranthus_hypochondriacus	AMhypScaffold_30135000.1
AMhypScaffold_30139930.1	amaranthus_hypochondriacus	AMhypScaffold_30139930.1
AMhypScaffold_30145850.1	amaranthus_hypochondriacus	AMhypScaffold_30145850.1
AMhypScaffold_30147810.1	amaranthus_hypochondriacus	AMhypScaffold_30147810.1
AMhypScaffold_40152790.1	amaranthus_hypochondriacus	AMhypScaffold_40152790.1
AMhypScaffold_40155220.1	amaranthus_hypochondriacus	AMhypScaffold_40155220.1
AMhypScaffold_40162620.1	amaranthus_hypochondriacus	AMhypScaffold_40162620.1
AMhypScaffold_40165780.1	amaranthus_hypochondriacus	AMhypScaffold_40165780.1
AMhypScaffold_50179600.1	amaranthus_hypochondriacus	AMhypScaffold_50179600.1
AMhypScaffold_60185660.1	amaranthus_hypochondriacus	AMhypScaffold_60185660.1
AMhypScaffold_60193480.1	amaranthus_hypochondriacus	AMhypScaffold_60193480.1
AMhypScaffold_70202050.1	amaranthus_hypochondriacus	AMhypScaffold_70202050.1
AMhypScaffold_80212010.1	amaranthus_hypochondriacus	AMhypScaffold_80212010.1
AMhypScaffold_80212020.1	amaranthus_hypochondriacus	AMhypScaffold_80212020.1
AMhypScaffold_80213300.1	amaranthus_hypochondriacus	AMhypScaffold_80213300.1
AMhypScaffold_80213940.1	amaranthus_hypochondriacus	AMhypScaffold_80213940.1
AMhypScaffold_80223640.1	amaranthus_hypochondriacus	AMhypScaffold_80223640.1
AMhypScaffold_80224080.1	amaranthus_hypochondriacus	AMhypScaffold_80224080.1
AMhypScaffold_90227150.1	amaranthus_hypochondriacus	AMhypScaffold_90227150.1
AMhypScaffold_90238280.1	amaranthus_hypochondriacus	AMhypScaffold_90238280.1
MAKER_02147-RA	amaranthus_palmeri	MAKER_02147-RA
MAKER_03521-RA	amaranthus_palmeri	MAKER_03521-RA
MAKER_03643-RA	amaranthus_palmeri	MAKER_03643-RA
MAKER_05148-RA	amaranthus_palmeri	MAKER_05148-RA
MAKER_05651-RA	amaranthus_palmeri	MAKER_05651-RA
MAKER_09914-RA	amaranthus_palmeri	MAKER_09914-RA
MAKER_10144-RA	amaranthus_palmeri	MAKER_10144-RA