T3O

Atlas summary family T3O.

Lineage Coverage

Detected in 783 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 29276 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
catharanthus_roseus_CRO_T033545	catharanthus_roseus	catharanthus_roseus_CRO_T033545
CEame02G0006610	cenchrus_americanus	CEame02G0006610
CEame02G0009750	cenchrus_americanus	CEame02G0009750
CEame02G0018490	cenchrus_americanus	CEame02G0018490
cenchrus_fungigraminus_GWHPBWDX023069.1	cenchrus_fungigraminus	cenchrus_fungigraminus_GWHPBWDX023069.1
cenchrus_fungigraminus_GWHPBWDX042002.1	cenchrus_fungigraminus	cenchrus_fungigraminus_GWHPBWDX042002.1
cenchrus_fungigraminus_GWHPBWDX055885.1	cenchrus_fungigraminus	cenchrus_fungigraminus_GWHPBWDX055885.1
cenchrus_fungigraminus_GWHPBWDX061334.1	cenchrus_fungigraminus	cenchrus_fungigraminus_GWHPBWDX061334.1
PenpuA20042873.g	cenchrus_purpureus	PenpuA20042873.g
PenpuB20052184.g	cenchrus_purpureus	PenpuB20052184.g
PenpuB60001858.g	cenchrus_purpureus	PenpuB60001858.g
centella_asiatica_evm.model.Scaffold_1.2693	centella_asiatica	centella_asiatica_evm.model.Scaffold_1.2693
centella_asiatica_evm.model.Scaffold_5.1277	centella_asiatica	centella_asiatica_evm.model.Scaffold_5.1277
centella_asiatica_evm.model.Scaffold_7.2108	centella_asiatica	centella_asiatica_evm.model.Scaffold_7.2108
centella_asiatica_evm.model.Scaffold_8.2305	centella_asiatica	centella_asiatica_evm.model.Scaffold_8.2305
Cfolscaffold6470300390	cephalotus_follicularis	Cfolscaffold6470300390
Cser01G0000170.1	cerasus_serrulata	Cser01G0000170.1
Cyed0A0G0107680	cerasus_yedoensis	Cyed0A0G0107680
Cyed0E0G0022210	cerasus_yedoensis	Cyed0E0G0022210
Cyed0E0G0026650	cerasus_yedoensis	Cyed0E0G0026650
Ccanascaffold231\|size3425460114650	cercis_canadensis	Ccanascaffold231\|size3425460114650
Ccanascaffold688\|size954380281940	cercis_canadensis	Ccanascaffold688\|size954380281940
Ccanascaffold693\|size1339750283190	cercis_canadensis	Ccanascaffold693\|size1339750283190
cercis_chinensis_GWHPBHAK027184	cercis_chinensis	cercis_chinensis_GWHPBHAK027184
ceriops_zippeliana_evm.model.Scaffold_9_RagTag.1523	ceriops_zippeliana	ceriops_zippeliana_evm.model.Scaffold_9_RagTag.1523
ceriops_zippeliana_evm.model.contig_145529.1	ceriops_zippeliana	ceriops_zippeliana_evm.model.contig_145529.1
Cfasscaffold552_cov2020201920	chamaecrista_fasciculata	Cfasscaffold552_cov2020201920
GBG70028	chara_braunii	GBG70028
GBG70029	chara_braunii	GBG70029
GBG70035	chara_braunii	GBG70035