PlantSME Plant secondary metabolism enzyme database
T3O

T3O

Atlas summary family T3O.

Lineage Coverage
Detected in 783 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Triticum turgidum
Triticum aestivum
Aegilops tauschii
Fragaria ananassa
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 29276 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
fragaria_chiloensis_maker-6B-augustus-gene-90.32-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-6B-augustus-gene-90.32-mRNA-1
fragaria_chiloensis_maker-6D-augustus-gene-256.10-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-6D-augustus-gene-256.10-mRNA-1
fragaria_chiloensis_maker-7B-exonerate_protein2genome-gene-194.41-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-7B-exonerate_protein2genome-gene-194.41-mRNA-1
fragaria_chiloensis_maker-7C-exonerate_protein2genome-gene-32.10-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-7C-exonerate_protein2genome-gene-32.10-mRNA-1
fragaria_iinumae_evm.model.scaf_41.1268 fragaria_iinumae fragaria_iinumae_evm.model.scaf_41.1268
FnilGWHABKC000000020092060.1 fragaria_nilgerrensis FnilGWHABKC000000020092060.1
FnilGWHABKC000000060217330.1 fragaria_nilgerrensis FnilGWHABKC000000060217330.1
FnilGWHABKC000000060228790.1 fragaria_nilgerrensis FnilGWHABKC000000060228790.1
fragaria_nipponica_maker-chr2-augustus-gene-93.4-mRNA-1 fragaria_nipponica fragaria_nipponica_maker-chr2-augustus-gene-93.4-mRNA-1
fragaria_nipponica_maker-chr3-augustus-gene-103.0-mRNA-1 fragaria_nipponica fragaria_nipponica_maker-chr3-augustus-gene-103.0-mRNA-1
fragaria_nipponica_maker-chr3-augustus-gene-301.62-mRNA-1 fragaria_nipponica fragaria_nipponica_maker-chr3-augustus-gene-301.62-mRNA-1
fragaria_nipponica_maker-chr6-exonerate_protein2genome-gene-136.100-mRNA-1 fragaria_nipponica fragaria_nipponica_maker-chr6-exonerate_protein2genome-gene-136.100-mRNA-1
fragaria_nipponica_maker-chr7-augustus-gene-168.0-mRNA-1 fragaria_nipponica fragaria_nipponica_maker-chr7-augustus-gene-168.0-mRNA-1
fragaria_nipponica_maker-chr7-exonerate_protein2genome-gene-163.53-mRNA-1 fragaria_nipponica fragaria_nipponica_maker-chr7-exonerate_protein2genome-gene-163.53-mRNA-1
fragaria_nubicola_evm.model.ctg141.21 fragaria_nubicola fragaria_nubicola_evm.model.ctg141.21
fragaria_nubicola_evm.model.ctg57.188 fragaria_nubicola fragaria_nubicola_evm.model.ctg57.188
Fves06G0047770.1 fragaria_vesca Fves06G0047770.1
fragaria_x_ananassa_augustus_masked-Fvb7-4-processed-gene-112.7-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_augustus_masked-Fvb7-4-processed-gene-112.7-mRNA-1
fragaria_x_ananassa_maker-Fvb3-4-snap-gene-53.60-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb3-4-snap-gene-53.60-mRNA-1
fragaria_x_ananassa_maker-Fvb5-1-snap-gene-85.59-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb5-1-snap-gene-85.59-mRNA-1
fragaria_x_ananassa_maker-Fvb6-1-augustus-gene-91.54-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb6-1-augustus-gene-91.54-mRNA-1
fragaria_x_ananassa_maker-Fvb6-3-augustus-gene-84.42-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb6-3-augustus-gene-84.42-mRNA-1
fragaria_x_ananassa_maker-Fvb6-3-snap-gene-327.66-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb6-3-snap-gene-327.66-mRNA-1
fragaria_x_ananassa_maker-Fvb6-4-augustus-gene-285.39-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb6-4-augustus-gene-285.39-mRNA-1
fragaria_x_ananassa_maker-Fvb7-1-augustus-gene-159.23-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb7-1-augustus-gene-159.23-mRNA-1
fragaria_x_ananassa_maker-Fvb7-1-snap-gene-113.54-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb7-1-snap-gene-113.54-mRNA-1
fragaria_x_ananassa_maker-Fvb7-3-snap-gene-129.35-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb7-3-snap-gene-129.35-mRNA-1
FexcContig10570009870.1 fraxinus_excelsior FexcContig10570009870.1
FexcContig12650028250.1 fraxinus_excelsior FexcContig12650028250.1
FexcContig14880047880.1 fraxinus_excelsior FexcContig14880047880.1