PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
zoysia_matrella_Zmw_sc02243.1.g00140.1.sm.mkhc zoysia_matrella zoysia_matrella_Zmw_sc02243.1.g00140.1.sm.mkhc
zoysia_matrella_Zmw_sc02815.1.g00030.1.sm.mk zoysia_matrella zoysia_matrella_Zmw_sc02815.1.g00030.1.sm.mk
zoysia_matrella_Zmw_sc03656.1.g00090.1.am.mk zoysia_matrella zoysia_matrella_Zmw_sc03656.1.g00090.1.am.mk
ZPZ_r1.0_Zpz_sc00045.1.g00620.1.sm.mkhc zoysia_pacifica ZPZ_r1.0_Zpz_sc00045.1.g00620.1.sm.mkhc
ZPZ_r1.0_Zpz_sc00865.1.g00170.1.sm.mk zoysia_pacifica ZPZ_r1.0_Zpz_sc00865.1.g00170.1.sm.mk
ZPZ_r1.0_Zpz_sc00865.1.g00180.1.am.mk zoysia_pacifica ZPZ_r1.0_Zpz_sc00865.1.g00180.1.am.mk
ZPZ_r1.0_Zpz_sc01167.1.g00080.1.sm.mkhc zoysia_pacifica ZPZ_r1.0_Zpz_sc01167.1.g00080.1.sm.mkhc
ZPZ_r1.0_Zpz_sc02256.1.g00030.1.sm.mkhc zoysia_pacifica ZPZ_r1.0_Zpz_sc02256.1.g00030.1.sm.mkhc
ZPZ_r1.0_Zpz_sc02479.1.g00090.1.am.mk zoysia_pacifica ZPZ_r1.0_Zpz_sc02479.1.g00090.1.am.mk
ZPZ_r1.0_Zpz_sc02995.1.g00030.1.am.mk zoysia_pacifica ZPZ_r1.0_Zpz_sc02995.1.g00030.1.am.mk
ZPZ_r1.0_Zpz_sc02995.1.g00040.1.sm.mk zoysia_pacifica ZPZ_r1.0_Zpz_sc02995.1.g00040.1.sm.mk
ZPZ_r1.0_Zpz_sc03086.1.g00020.1.am.mk zoysia_pacifica ZPZ_r1.0_Zpz_sc03086.1.g00020.1.am.mk
ZPZ_r1.0_Zpz_sc03086.1.g00030.1.am.mk zoysia_pacifica ZPZ_r1.0_Zpz_sc03086.1.g00030.1.am.mk
ZPZ_r1.0_Zpz_sc05429.1.g00040.1.am.mk zoysia_pacifica ZPZ_r1.0_Zpz_sc05429.1.g00040.1.am.mk
Aalbaalba5_s000193420118960.1 abies_alba Aalbaalba5_s000193420118960.1
Aalbaalba5_s000248770144220.1 abies_alba Aalbaalba5_s000248770144220.1
Aalbaalba5_s000377330199550.1 abies_alba Aalbaalba5_s000377330199550.1
Aalbaalba5_s000437990225590.1 abies_alba Aalbaalba5_s000437990225590.1
Aalbaalba5_s001495320514910.1 abies_alba Aalbaalba5_s001495320514910.1
XP_027333829.1 abrus_precatorius XP_027333829.1
XP_027334476.1 abrus_precatorius XP_027334476.1
XP_027338131.1 abrus_precatorius XP_027338131.1
XP_027340905.1 abrus_precatorius XP_027340905.1
XP_027350831.1 abrus_precatorius XP_027350831.1
XP_027350832.1 abrus_precatorius XP_027350832.1
XP_027357678.1 abrus_precatorius XP_027357678.1
XP_027359500.1 abrus_precatorius XP_027359500.1
XP_027360204.1 abrus_precatorius XP_027360204.1
acacia_pycnantha_KAI9074585.1 acacia_pycnantha acacia_pycnantha_KAI9074585.1
acacia_pycnantha_KAI9075701.1 acacia_pycnantha acacia_pycnantha_KAI9075701.1