PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Acom01G0006750.1 ananas_comosus Acom01G0006750.1
Acom06G0005040.1 ananas_comosus Acom06G0005040.1
Acom20G0000340.1 ananas_comosus Acom20G0000340.1
Acom20G0005120.1 ananas_comosus Acom20G0005120.1
Acom20G0005130.1 ananas_comosus Acom20G0005130.1
Acomscaffold_16680009450.1 ananas_comosus Acomscaffold_16680009450.1
Arupctg000670_np121212120027640 andreaea_rupestris Arupctg000670_np121212120027640
Arupctg001283_np121212120133760 andreaea_rupestris Arupctg001283_np121212120133760
Arupctg001400_np121212120155190 andreaea_rupestris Arupctg001400_np121212120155190
Arupctg001664_np121212120202000 andreaea_rupestris Arupctg001664_np121212120202000
Arupctg001752_np121212120213430 andreaea_rupestris Arupctg001752_np121212120213430
Awil13580032850 andreaea_wilsonii Awil13580032850
Awil8280142510 andreaea_wilsonii Awil8280142510
Awil8950149370 andreaea_wilsonii Awil8950149370
Amac1676640107990 andreaeobryum_macrosporum Amac1676640107990
Amac1680520114920 andreaeobryum_macrosporum Amac1680520114920
Amac933270141440 andreaeobryum_macrosporum Amac933270141440
andrographis_paniculata_XP_051117995.1 andrographis_paniculata andrographis_paniculata_XP_051117995.1
andrographis_paniculata_XP_051118007.1 andrographis_paniculata andrographis_paniculata_XP_051118007.1
andrographis_paniculata_XP_051123179.1 andrographis_paniculata andrographis_paniculata_XP_051123179.1
andrographis_paniculata_XP_051123180.1 andrographis_paniculata andrographis_paniculata_XP_051123180.1
andrographis_paniculata_XP_051127197.1 andrographis_paniculata andrographis_paniculata_XP_051127197.1
andrographis_paniculata_XP_051133217.1 andrographis_paniculata andrographis_paniculata_XP_051133217.1
andrographis_paniculata_XP_051140218.1 andrographis_paniculata andrographis_paniculata_XP_051140218.1
angelica_sinensis_AS02G02905-RA angelica_sinensis angelica_sinensis_AS02G02905-RA
angelica_sinensis_AS03G02600-RA angelica_sinensis angelica_sinensis_AS03G02600-RA
angelica_sinensis_AS09G00766-RA angelica_sinensis angelica_sinensis_AS09G00766-RA
anisodus_acutangulus_KAJ8526264.1 anisodus_acutangulus anisodus_acutangulus_KAJ8526264.1
anisodus_acutangulus_KAJ8526496.1 anisodus_acutangulus anisodus_acutangulus_KAJ8526496.1
anisodus_acutangulus_KAJ8540401.1 anisodus_acutangulus anisodus_acutangulus_KAJ8540401.1