PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
bretschneidera_sinensis_BsiG0032277.1 bretschneidera_sinensis bretschneidera_sinensis_BsiG0032277.1
bretschneidera_sinensis_BsiG0033274.1 bretschneidera_sinensis bretschneidera_sinensis_BsiG0033274.1
bruguiera_cylindrica_evm.model.Scaffold_15_RagTag.305 bruguiera_cylindrica bruguiera_cylindrica_evm.model.Scaffold_15_RagTag.305
bruguiera_cylindrica_evm.model.Scaffold_15_RagTag.310 bruguiera_cylindrica bruguiera_cylindrica_evm.model.Scaffold_15_RagTag.310
bruguiera_cylindrica_evm.model.Scaffold_3_RagTag.611 bruguiera_cylindrica bruguiera_cylindrica_evm.model.Scaffold_3_RagTag.611
bruguiera_cylindrica_evm.model.Scaffold_6_RagTag.1539 bruguiera_cylindrica bruguiera_cylindrica_evm.model.Scaffold_6_RagTag.1539
bruguiera_cylindrica_evm.model.Scaffold_9_RagTag.491 bruguiera_cylindrica bruguiera_cylindrica_evm.model.Scaffold_9_RagTag.491
bruguiera_parviflora_evm.model.Scaffold_3.617 bruguiera_parviflora bruguiera_parviflora_evm.model.Scaffold_3.617
bruguiera_parviflora_evm.model.Scaffold_6.1443 bruguiera_parviflora bruguiera_parviflora_evm.model.Scaffold_6.1443
bruguiera_sexangula_evm.model.Scaffold_15_RagTag.307 bruguiera_sexangula bruguiera_sexangula_evm.model.Scaffold_15_RagTag.307
bruguiera_sexangula_evm.model.Scaffold_15_RagTag.308 bruguiera_sexangula bruguiera_sexangula_evm.model.Scaffold_15_RagTag.308
bruguiera_sexangula_evm.model.Scaffold_3_RagTag.777 bruguiera_sexangula bruguiera_sexangula_evm.model.Scaffold_3_RagTag.777
bruguiera_sexangula_evm.model.Scaffold_6_RagTag.1750 bruguiera_sexangula bruguiera_sexangula_evm.model.Scaffold_6_RagTag.1750
bruguiera_sexangula_evm.model.Scaffold_9_RagTag.540 bruguiera_sexangula bruguiera_sexangula_evm.model.Scaffold_9_RagTag.540
bruguiera_sexangula_evm.model.Scaffold_9_RagTag.542 bruguiera_sexangula bruguiera_sexangula_evm.model.Scaffold_9_RagTag.542
Bnov1870016600 bryhnia_novae_angliae Bnov1870016600
Bnov2710032580 bryhnia_novae_angliae Bnov2710032580
Bnov854100164380 bryhnia_novae_angliae Bnov854100164380
Bnov858460204570 bryhnia_novae_angliae Bnov858460204570
Bnov980247750 bryhnia_novae_angliae Bnov980247750
Bill443320130420 bryoandersonia_illecebra Bill443320130420
Bill450650233180 bryoandersonia_illecebra Bill450650233180
Bill451100242730 bryoandersonia_illecebra Bill451100242730
Bnorscaffold_110048420 bryoxiphium_norvegicum Bnorscaffold_110048420
Bnorscaffold_120085130 bryoxiphium_norvegicum Bnorscaffold_120085130
Bnorscaffold_50228950 bryoxiphium_norvegicum Bnorscaffold_50228950
Bnorscaffold_70256940 bryoxiphium_norvegicum Bnorscaffold_70256940
Bknoscaffold_100048540 bryum_knowltonii Bknoscaffold_100048540
Bknoscaffold_110068500 bryum_knowltonii Bknoscaffold_110068500
Bknoscaffold_110079430 bryum_knowltonii Bknoscaffold_110079430