PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Ccanascaffold297|size4807460146830 cercis_canadensis Ccanascaffold297|size4807460146830
Ccanascaffold34|size10751870176760 cercis_canadensis Ccanascaffold34|size10751870176760
Ccanascaffold627|size1125960269840 cercis_canadensis Ccanascaffold627|size1125960269840
Ccanascaffold64|size7485710274050 cercis_canadensis Ccanascaffold64|size7485710274050
cercis_chinensis_GWHPBHAK007458 cercis_chinensis cercis_chinensis_GWHPBHAK007458
cercis_chinensis_GWHPBHAK007907 cercis_chinensis cercis_chinensis_GWHPBHAK007907
cercis_chinensis_GWHPBHAK015094 cercis_chinensis cercis_chinensis_GWHPBHAK015094
cercis_chinensis_GWHPBHAK016891 cercis_chinensis cercis_chinensis_GWHPBHAK016891
cercis_chinensis_GWHPBHAK025008 cercis_chinensis cercis_chinensis_GWHPBHAK025008
ceriops_zippeliana_evm.model.Scaffold_17_RagTag.1019 ceriops_zippeliana ceriops_zippeliana_evm.model.Scaffold_17_RagTag.1019
ceriops_zippeliana_evm.model.Scaffold_17_RagTag.289 ceriops_zippeliana ceriops_zippeliana_evm.model.Scaffold_17_RagTag.289
ceriops_zippeliana_evm.model.Scaffold_17_RagTag.290 ceriops_zippeliana ceriops_zippeliana_evm.model.Scaffold_17_RagTag.290
ceriops_zippeliana_evm.model.Scaffold_4_RagTag.1231 ceriops_zippeliana ceriops_zippeliana_evm.model.Scaffold_4_RagTag.1231
ceriops_zippeliana_evm.model.Scaffold_4_RagTag.1887 ceriops_zippeliana ceriops_zippeliana_evm.model.Scaffold_4_RagTag.1887
ceriops_zippeliana_evm.model.Scaffold_7_RagTag.1261 ceriops_zippeliana ceriops_zippeliana_evm.model.Scaffold_7_RagTag.1261
ceriops_zippeliana_evm.model.Scaffold_7_RagTag.773 ceriops_zippeliana ceriops_zippeliana_evm.model.Scaffold_7_RagTag.773
Cfasscaffold1622_cov1990058860 chamaecrista_fasciculata Cfasscaffold1622_cov1990058860
Cfasscaffold3169_cov1930137600 chamaecrista_fasciculata Cfasscaffold3169_cov1930137600
Cfasscaffold349_cov2170148730 chamaecrista_fasciculata Cfasscaffold349_cov2170148730
Cfasscaffold5455_cov2190199960 chamaecrista_fasciculata Cfasscaffold5455_cov2190199960
Cfasscaffold6496_cov2000224580 chamaecrista_fasciculata Cfasscaffold6496_cov2000224580
GBG60797 chara_braunii GBG60797
GBG61321 chara_braunii GBG61321
GBG73735 chara_braunii GBG73735
GBG73742 chara_braunii GBG73742
GBG77883 chara_braunii GBG77883
GBG77886 chara_braunii GBG77886
GBG89835 chara_braunii GBG89835
Cf002423.mRNA1 chenopodium_giganteum Cf002423.mRNA1
Cf002843.mRNA1 chenopodium_giganteum Cf002843.mRNA1