PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Ccavscaffold_450122830 cyathodium_cavernarum Ccavscaffold_450122830
cymbidium_goeringii_g53634 cymbidium_goeringii cymbidium_goeringii_g53634
cymbidium_goeringii_g53649 cymbidium_goeringii cymbidium_goeringii_g53649
cymbidium_goeringii_g57655 cymbidium_goeringii cymbidium_goeringii_g57655
cymbidium_goeringii_gene_7688 cymbidium_goeringii cymbidium_goeringii_gene_7688
cymbidium_goeringii_gene_8843 cymbidium_goeringii cymbidium_goeringii_gene_8843
cymbidium_goeringii_gene_9210 cymbidium_goeringii cymbidium_goeringii_gene_9210
Ccarscaffold_3050129550.1 cynara_cardunculus Ccarscaffold_3050129550.1
Ccarscaffold_980263490.1 cynara_cardunculus Ccarscaffold_980263490.1
cyperus_esculentus_CESC_00172 cyperus_esculentus cyperus_esculentus_CESC_00172
cyperus_esculentus_CESC_00676 cyperus_esculentus cyperus_esculentus_CESC_00676
cyperus_esculentus_CESC_12804 cyperus_esculentus cyperus_esculentus_CESC_12804
cyperus_esculentus_CESC_12805 cyperus_esculentus cyperus_esculentus_CESC_12805
cyperus_esculentus_CESC_18418 cyperus_esculentus cyperus_esculentus_CESC_18418
cyperus_esculentus_CESC_18419 cyperus_esculentus cyperus_esculentus_CESC_18419
cyperus_esculentus_CESC_20945 cyperus_esculentus cyperus_esculentus_CESC_20945
cyperus_esculentus_CESC_22700 cyperus_esculentus cyperus_esculentus_CESC_22700
DJ01Gene49336 daemonorops_jenkinsiana DJ01Gene49336
DJ01Gene50461 daemonorops_jenkinsiana DJ01Gene50461
DJ01Gene57838 daemonorops_jenkinsiana DJ01Gene57838
DJ01Gene68381 daemonorops_jenkinsiana DJ01Gene68381
dalbergia_odorifera_evm.model.scaffold_100.445 dalbergia_odorifera dalbergia_odorifera_evm.model.scaffold_100.445
dalbergia_odorifera_evm.model.scaffold_14.197.1 dalbergia_odorifera dalbergia_odorifera_evm.model.scaffold_14.197.1
dalbergia_odorifera_evm.model.scaffold_248.292 dalbergia_odorifera dalbergia_odorifera_evm.model.scaffold_248.292
dalbergia_odorifera_evm.model.scaffold_29.273 dalbergia_odorifera dalbergia_odorifera_evm.model.scaffold_29.273
dalbergia_odorifera_evm.model.scaffold_29.274 dalbergia_odorifera dalbergia_odorifera_evm.model.scaffold_29.274
dalbergia_odorifera_evm.model.scaffold_384.6 dalbergia_odorifera dalbergia_odorifera_evm.model.scaffold_384.6
dalbergia_odorifera_evm.model.scaffold_97.285 dalbergia_odorifera dalbergia_odorifera_evm.model.scaffold_97.285
dalbergia_odorifera_evm.model.scaffold_97.286 dalbergia_odorifera dalbergia_odorifera_evm.model.scaffold_97.286
dasypyrum_villosum_GWHPBJXA008347 dasypyrum_villosum dasypyrum_villosum_GWHPBJXA008347