PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
digitaria_exilis_Dexi7A01G0012640.1 digitaria_exilis digitaria_exilis_Dexi7A01G0012640.1
digitaria_exilis_Dexi7A01G0016420.1 digitaria_exilis digitaria_exilis_Dexi7A01G0016420.1
digitaria_exilis_Dexi7B01G0008700.1 digitaria_exilis digitaria_exilis_Dexi7B01G0008700.1
digitaria_exilis_Dexi7B01G0008790.1 digitaria_exilis digitaria_exilis_Dexi7B01G0008790.1
digitaria_exilis_Dexi7B01G0017010.1 digitaria_exilis digitaria_exilis_Dexi7B01G0017010.1
digitaria_exilis_Dexi9A01G0010860.1 digitaria_exilis digitaria_exilis_Dexi9A01G0010860.1
digitaria_exilis_Dexi9A01G0041860.1 digitaria_exilis digitaria_exilis_Dexi9A01G0041860.1
digitaria_exilis_Dexi9B01G0010410.1 digitaria_exilis digitaria_exilis_Dexi9B01G0010410.1
digitaria_exilis_Dexi9B01G0041010.1 digitaria_exilis digitaria_exilis_Dexi9B01G0041010.1
dillenia_turbinata_DITU_012742-RA dillenia_turbinata dillenia_turbinata_DITU_012742-RA
dillenia_turbinata_DITU_021659-RA dillenia_turbinata dillenia_turbinata_DITU_021659-RA
dillenia_turbinata_DITU_025178-RA dillenia_turbinata dillenia_turbinata_DITU_025178-RA
dillenia_turbinata_DITU_029118-RA dillenia_turbinata dillenia_turbinata_DITU_029118-RA
dillenia_turbinata_DITU_033116-RA dillenia_turbinata dillenia_turbinata_DITU_033116-RA
Dlonscaffold10450015130 dimocarpus_longan Dlonscaffold10450015130
Dlonscaffold11780035990 dimocarpus_longan Dlonscaffold11780035990
Dlonscaffold11780036000 dimocarpus_longan Dlonscaffold11780036000
Dlonscaffold11780036020 dimocarpus_longan Dlonscaffold11780036020
Dlonscaffold2290142150 dimocarpus_longan Dlonscaffold2290142150
Dlonscaffold2860174970 dimocarpus_longan Dlonscaffold2860174970
Dlonscaffold5510284210 dimocarpus_longan Dlonscaffold5510284210
diospyros_kaki_evm.model.contig14322.1 diospyros_kaki diospyros_kaki_evm.model.contig14322.1
diospyros_kaki_evm.model.contig15477.2 diospyros_kaki diospyros_kaki_evm.model.contig15477.2
diospyros_kaki_evm.model.contig15900.1 diospyros_kaki diospyros_kaki_evm.model.contig15900.1
diospyros_kaki_evm.model.contig2116.71 diospyros_kaki diospyros_kaki_evm.model.contig2116.71
diospyros_kaki_evm.model.contig2251.516 diospyros_kaki diospyros_kaki_evm.model.contig2251.516
diospyros_kaki_evm.model.contig2313.510 diospyros_kaki diospyros_kaki_evm.model.contig2313.510
diospyros_kaki_evm.model.contig2367.215 diospyros_kaki diospyros_kaki_evm.model.contig2367.215
diospyros_kaki_evm.model.contig2405.496 diospyros_kaki diospyros_kaki_evm.model.contig2405.496
diospyros_kaki_evm.model.contig2420.66 diospyros_kaki diospyros_kaki_evm.model.contig2420.66