PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
echinochloa_oryzicola_GWHPBDNS031795 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS031795
echinochloa_oryzicola_GWHPBDNS032714 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS032714
echinochloa_oryzicola_GWHPBDNS034136 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS034136
echinochloa_oryzicola_GWHPBDNS037754 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS037754
echinochloa_oryzicola_GWHPBDNS039100 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS039100
echinochloa_oryzicola_GWHPBDNS039810 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS039810
echinochloa_oryzicola_GWHPBDNS044889 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS044889
echinochloa_oryzicola_GWHPBDNS063259 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS063259
echinochloa_oryzicola_GWHPBDNS065688 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS065688
echinochloa_oryzicola_GWHPBDNS065704 echinochloa_oryzicola echinochloa_oryzicola_GWHPBDNS065704
Eobt5944020118920 ectropothecium_obtusulum Eobt5944020118920
Eobt5944940163060 ectropothecium_obtusulum Eobt5944940163060
Eobt5945810224080 ectropothecium_obtusulum Eobt5945810224080
Eobt5945850231900 ectropothecium_obtusulum Eobt5945850231900
Eobt5945870238420 ectropothecium_obtusulum Eobt5945870238420
elaeis_guineensis_Egu007538-mRNA-1 elaeis_guineensis elaeis_guineensis_Egu007538-mRNA-1
elaeis_guineensis_Egu008533-mRNA-1 elaeis_guineensis elaeis_guineensis_Egu008533-mRNA-1
elaeis_guineensis_Egu014821-mRNA-1 elaeis_guineensis elaeis_guineensis_Egu014821-mRNA-1
elaeis_guineensis_Egu025071-mRNA-1 elaeis_guineensis elaeis_guineensis_Egu025071-mRNA-1
Ecor1BG0004790.1 eleusine_coracana Ecor1BG0004790.1
Ecor3AG0008460.1 eleusine_coracana Ecor3AG0008460.1
Ecor3AG0023090.1 eleusine_coracana Ecor3AG0023090.1
Ecor3BG0008750.1 eleusine_coracana Ecor3BG0008750.1
Ecor3BG0024910.1 eleusine_coracana Ecor3BG0024910.1
Ecor4AG0006780.1 eleusine_coracana Ecor4AG0006780.1
Ecor4AG0014150.1 eleusine_coracana Ecor4AG0014150.1
Ecor4AG0014190.1 eleusine_coracana Ecor4AG0014190.1
Ecor4BG0007020.1 eleusine_coracana Ecor4BG0007020.1
Ecor4BG0014540.1 eleusine_coracana Ecor4BG0014540.1
Ecor4BG0014600.1 eleusine_coracana Ecor4BG0014600.1