TDC

Atlas summary family TDC.

Lineage Coverage

Detected in 29 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Miscanthus lutarioriparius

Chrysanthemum seticuspe

Zoysia matrella

Aegilops tauschii

Related Modules

Alkaloid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
Crubscaffold_10026430.1	capsella_rubella	Crubscaffold_10026430.1
Crubscaffold_30110080.1	capsella_rubella	Crubscaffold_30110080.1
Crubscaffold_30110080.2	capsella_rubella	Crubscaffold_30110080.2
Crubscaffold_30110090.1	capsella_rubella	Crubscaffold_30110090.1
Crubscaffold_30110100.1	capsella_rubella	Crubscaffold_30110100.1
Crubscaffold_70222000.1	capsella_rubella	Crubscaffold_70222000.1
Cann07G0014600.1	capsicum_annuum	Cann07G0014600.1
Cann07G0014610.1	capsicum_annuum	Cann07G0014610.1
Cann07G0015570.1	capsicum_annuum	Cann07G0015570.1
Cann09G0010100.1	capsicum_annuum	Cann09G0010100.1
CbacCBv1.2.scaffold3940224030.1	capsicum_baccatum	CbacCBv1.2.scaffold3940224030.1
CbacCBv1.2.scaffold8880337880.1	capsicum_baccatum	CbacCBv1.2.scaffold8880337880.1
CbacCBv1.2.scaffold8880337890.1	capsicum_baccatum	CbacCBv1.2.scaffold8880337890.1
CAchiCCv1.2.scaffold1870095360.1	capsicum_chinense	CAchiCCv1.2.scaffold1870095360.1
CAchiCCv1.2.scaffold7580298470.1	capsicum_chinense	CAchiCCv1.2.scaffold7580298470.1
CAchiCCv1.2.scaffold7580298480.1	capsicum_chinense	CAchiCCv1.2.scaffold7580298480.1
cardamine_enshiensis_GWHPBHEU026208	cardamine_enshiensis	cardamine_enshiensis_GWHPBHEU026208
cardamine_enshiensis_GWHPBHEU032950	cardamine_enshiensis	cardamine_enshiensis_GWHPBHEU032950
cardamine_enshiensis_GWHPBHEU043822	cardamine_enshiensis	cardamine_enshiensis_GWHPBHEU043822
cardamine_enshiensis_GWHPBHEU048487	cardamine_enshiensis	cardamine_enshiensis_GWHPBHEU048487
Chir01G0027300.1	cardamine_hirsuta	Chir01G0027300.1
Chir01G0027300.2	cardamine_hirsuta	Chir01G0027300.2
Chir03G0036030.1	cardamine_hirsuta	Chir03G0036030.1
Chir03G0036030.2	cardamine_hirsuta	Chir03G0036030.2
Cresscaffold529_size403770174350.1	cardamine_resedifolia	Cresscaffold529_size403770174350.1
Cresscaffold580_size820660183470.1	cardamine_resedifolia	Cresscaffold580_size820660183470.1
Cresscaffold7781_size21400214110.1	cardamine_resedifolia	Cresscaffold7781_size21400214110.1
Cresscaffold814_size707830220490.1	cardamine_resedifolia	Cresscaffold814_size707830220490.1
Cresscaffold814_size707830220500.1	cardamine_resedifolia	Cresscaffold814_size707830220500.1
Cresscaffold814_size707830220510.1	cardamine_resedifolia	Cresscaffold814_size707830220510.1