TDC

Atlas summary family TDC.

Lineage Coverage

Detected in 29 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Miscanthus lutarioriparius

Chrysanthemum seticuspe

Zoysia matrella

Aegilops tauschii

Related Modules

Alkaloid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
castanopsis_hystrix_GWHPBWDD022127	castanopsis_hystrix	castanopsis_hystrix_GWHPBWDD022127
casuarina_equisetifolia_CCG012426	casuarina_equisetifolia	casuarina_equisetifolia_CCG012426
casuarina_equisetifolia_CCG012428	casuarina_equisetifolia	casuarina_equisetifolia_CCG012428
casuarina_equisetifolia_CCG012430	casuarina_equisetifolia	casuarina_equisetifolia_CCG012430
casuarina_equisetifolia_CCG014616	casuarina_equisetifolia	casuarina_equisetifolia_CCG014616
casuarina_equisetifolia_CCG014617	casuarina_equisetifolia	casuarina_equisetifolia_CCG014617
casuarina_equisetifolia_CCG028157	casuarina_equisetifolia	casuarina_equisetifolia_CCG028157
casuarina_equisetifolia_CCG029507	casuarina_equisetifolia	casuarina_equisetifolia_CCG029507
Cglascaffold260100570	casuarina_glauca	Cglascaffold260100570
Cglascaffold2670106440	casuarina_glauca	Cglascaffold2670106440
Cglascaffold2670106450	casuarina_glauca	Cglascaffold2670106450
Cglascaffold2770112700	casuarina_glauca	Cglascaffold2770112700
Cglascaffold90251050	casuarina_glauca	Cglascaffold90251050
Cglascaffold90251090	casuarina_glauca	Cglascaffold90251090
Cnit1996860035380	catagonium_nitens	Cnit1996860035380
Cnit2279580065960	catagonium_nitens	Cnit2279580065960
Cnit2279580065970	catagonium_nitens	Cnit2279580065970
Cnit2555670159120	catagonium_nitens	Cnit2555670159120
Cnit2557350160930	catagonium_nitens	Cnit2557350160930
catharanthus_roseus_CRO_T006098	catharanthus_roseus	catharanthus_roseus_CRO_T006098
catharanthus_roseus_CRO_T016393	catharanthus_roseus	catharanthus_roseus_CRO_T016393
CEame01G0003330	cenchrus_americanus	CEame01G0003330
CEame01G0003540	cenchrus_americanus	CEame01G0003540
CEame04G0015250	cenchrus_americanus	CEame04G0015250
CEame04G0015970	cenchrus_americanus	CEame04G0015970
CEame04G0015980	cenchrus_americanus	CEame04G0015980
CEame04G0016940	cenchrus_americanus	CEame04G0016940
CEame04G0016950	cenchrus_americanus	CEame04G0016950
CEame04G0016960	cenchrus_americanus	CEame04G0016960
CEame04G0016980	cenchrus_americanus	CEame04G0016980