PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
prunus_fruticosa_Pper_rna-XM_020569579.1_R0 prunus_fruticosa prunus_fruticosa_Pper_rna-XM_020569579.1_R0
prunus_humilis_GWHPBCKI000328 prunus_humilis prunus_humilis_GWHPBCKI000328
prunus_humilis_GWHPBCKI015029 prunus_humilis prunus_humilis_GWHPBCKI015029
prunus_humilis_GWHPBCKI018650 prunus_humilis prunus_humilis_GWHPBCKI018650
prunus_humilis_GWHPBCKI018651 prunus_humilis prunus_humilis_GWHPBCKI018651
prunus_humilis_GWHPBCKI024724 prunus_humilis prunus_humilis_GWHPBCKI024724
prunus_humilis_GWHPBCKI024725 prunus_humilis prunus_humilis_GWHPBCKI024725
prunus_kansuensis_Pka01g5626 prunus_kansuensis prunus_kansuensis_Pka01g5626
prunus_kansuensis_Pka03g2401 prunus_kansuensis prunus_kansuensis_Pka03g2401
prunus_kansuensis_Pka08g0239 prunus_kansuensis prunus_kansuensis_Pka08g0239
prunus_kansuensis_Pka08g2161 prunus_kansuensis prunus_kansuensis_Pka08g2161
prunus_kanzakura_KWZCAM1g4941.1 prunus_kanzakura prunus_kanzakura_KWZCAM1g4941.1
prunus_kanzakura_KWZCAM3g3045.1 prunus_kanzakura prunus_kanzakura_KWZCAM3g3045.1
prunus_kanzakura_KWZCAM5g1032.1 prunus_kanzakura prunus_kanzakura_KWZCAM5g1032.1
prunus_kanzakura_KWZCAM8g0441.1 prunus_kanzakura prunus_kanzakura_KWZCAM8g0441.1
prunus_kanzakura_KWZSPE0g1168.1 prunus_kanzakura prunus_kanzakura_KWZSPE0g1168.1
prunus_kanzakura_KWZSPE1g2890.1 prunus_kanzakura prunus_kanzakura_KWZSPE1g2890.1
prunus_kanzakura_KWZSPE7g0028.1 prunus_kanzakura prunus_kanzakura_KWZSPE7g0028.1
Pruma.4G098800.t1.p1_1 prunus_mandshurica Pruma.4G098800.t1.p1_1
Pruma.8G033300.t1.p1_1 prunus_mandshurica Pruma.8G033300.t1.p1_1
Pruma.8G045700.t1.p1_1 prunus_mandshurica Pruma.8G045700.t1.p1_1
Pruma.8G103800.t1.p1_1 prunus_mandshurica Pruma.8G103800.t1.p1_1
prunus_mira_Pmi01g5906 prunus_mira prunus_mira_Pmi01g5906
prunus_mira_Pmi08g0261 prunus_mira prunus_mira_Pmi08g0261
prunus_mongolica_GWHPBQDV004899.1 prunus_mongolica prunus_mongolica_GWHPBQDV004899.1
prunus_mongolica_GWHPBQDV021405.1 prunus_mongolica prunus_mongolica_GWHPBQDV021405.1
prunus_mongolica_GWHPBQDV023631.1 prunus_mongolica prunus_mongolica_GWHPBQDV023631.1
XP_008218831.1 prunus_mume XP_008218831.1
XP_008243632.1 prunus_mume XP_008243632.1
Pper01G0056050.1 prunus_persica Pper01G0056050.1