PlantSME Plant secondary metabolism enzyme database
TYDC_DDC

TYDC_DDC

Atlas summary family TYDC_DDC.

Lineage Coverage
Detected in 40 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Diospyros kaki
Fragaria ananassa
Alnus glutinosa
Averrhoa carambola
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 49 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
fragaria_x_ananassa_maker-Fvb2-4-augustus-gene-103.42-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb2-4-augustus-gene-103.42-mRNA-1
fragaria_x_ananassa_maker-Fvb3-3-snap-gene-35.62-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb3-3-snap-gene-35.62-mRNA-1
fragaria_x_ananassa_maker-Fvb3-4-augustus-gene-242.40-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb3-4-augustus-gene-242.40-mRNA-1
fragaria_x_ananassa_maker-Fvb3-4-snap-gene-242.56-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb3-4-snap-gene-242.56-mRNA-1
FexcContig13510036560.1 fraxinus_excelsior FexcContig13510036560.1
FexcContig16540061190.1 fraxinus_excelsior FexcContig16540061190.1
FexcContig26660136400.1 fraxinus_excelsior FexcContig26660136400.1
FexcContig30010158540.1 fraxinus_excelsior FexcContig30010158540.1
FexcContig301030159160.1 fraxinus_excelsior FexcContig301030159160.1
FexcContig49200248430.1 fraxinus_excelsior FexcContig49200248430.1
FexcContig49640249860.1 fraxinus_excelsior FexcContig49640249860.1
FexcContig49640249860.2 fraxinus_excelsior FexcContig49640249860.2
FexcContig920373150.1 fraxinus_excelsior FexcContig920373150.1
fraxinus_pennsylvanica_Fp_g15965 fraxinus_pennsylvanica fraxinus_pennsylvanica_Fp_g15965
fraxinus_pennsylvanica_Fp_g29163 fraxinus_pennsylvanica fraxinus_pennsylvanica_Fp_g29163
fraxinus_pennsylvanica_Fp_g35890 fraxinus_pennsylvanica fraxinus_pennsylvanica_Fp_g35890
fraxinus_pennsylvanica_Fp_g41605 fraxinus_pennsylvanica fraxinus_pennsylvanica_Fp_g41605
fraxinus_pennsylvanica_Fp_g43620 fraxinus_pennsylvanica fraxinus_pennsylvanica_Fp_g43620
Fmon4047510103930 frullania_moniliata Fmon4047510103930
Fmon4070950179920 frullania_moniliata Fmon4070950179920
Fhygscaffold_210195850 funaria_hygrometrica Fhygscaffold_210195850
Fhygscaffold_240241270 funaria_hygrometrica Fhygscaffold_240241270
Gackstroemia6124050156240 gackstroemia Gackstroemia6124050156240
Gmag6124050156240 gackstroemia_magellanica Gmag6124050156240
GelaGWHAAEX000000810100600.1 gastrodia_elata GelaGWHAAEX000000810100600.1
GelaGWHAAEX000002060170820.1 gastrodia_elata GelaGWHAAEX000002060170820.1
gastrodia_menghaiensis_evm.model.scaffold_126.238 gastrodia_menghaiensis gastrodia_menghaiensis_evm.model.scaffold_126.238
gastrodia_menghaiensis_evm.model.scaffold_41.206 gastrodia_menghaiensis gastrodia_menghaiensis_evm.model.scaffold_41.206
Gtri01G0003740 gilleni_trifoliata Gtri01G0003740
Gtri01G0022710 gilleni_trifoliata Gtri01G0022710