PlantSME Plant secondary metabolism enzyme database

Bca_GomB02g59820.mRNA1 brassica_carinata

Protein ID: Bca_GomB02g59820.mRNA1
Record level: protein/isoform record
Species：Brassica carinata (brassica_carinata)
2
Assignments
Phylogenetic Position
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Annotation Path
Each assignment is summarized in the order Pathway -> Module -> Family -> Library -> Method.
Pathway Flavonoid pathway
→
Module Flavonoid portable pathway
→
Family CHS
→
Library Flavonoid Official Library
→
Method blast+hmm
Pathway Alkaloid pathway
→
Module Alkaloid portable pathway
→
Family PYKS
→
Library Alkaloid Official Library
→
Method hmm
Annotation Details
Pathway Module Family Library Method
Flavonoid pathway Flavonoid portable pathway CHS Flavonoid Official Library blast+hmm
Alkaloid pathway Alkaloid portable pathway PYKS Alkaloid Official Library hmm
Protein Sequence
MSHNQDQPHRPVPVHVTNADQNPNNLPNFLLSVRLKYVKLGYHYLISNALYILLLPLLAATIANLSSFSLSDLTIFYNHL
RFHFLSATLATALLIALSTAYFTTRPRRVFLLDFSCYKPDPSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQK
TYFPEALLRVPPNPCMEEARKEAETVMFGAIDAVLEKTGIKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNILSYNL
GGMGCSAGLISIDLAKQLLQVQPNSYALVVSTENITQNWYLGNDRSMLLSNCIFRMGGAAVLLSNRSSDRRRSKYQLIHT
VRTHKGADDNAFGCVYQREDNNAEETGKVGVSLSKNLMAIAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFKVKKI
KPYIPDFKLAFEHFCIHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAF
GSGFKCNSAVWKALRTIDPVEKSNPWSDEIHEFPVAVPRITPVTSS