PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Bca_GomB02g102840.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB02g102850.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB02g102970.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB02g28490.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB02g28510.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB02g30370.mRNA2 Alkaloid 16OMT medium borderline
Bca_GomB02g30380.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB02g30390.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB02g55450.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB02g89910.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB02g90450.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB02g96040.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB02g96560.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB02g96590.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB03g14320.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB03g14330.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB03g15530.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB03g28840.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB03g28850.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB03g39540.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB03g39550.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB03g39560.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB03g46930.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB03g46940.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB03g69500.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB03g69910.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB03g70420.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB03g85590.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB03g85600.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB03g85610.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB03g85620.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB05g02220.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB05g22080.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB05g54170.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB05g86020.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB05g86050.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB06g63580.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB07g60430.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB07g64920.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB08g01350.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB08g22660.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB08g48300.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB08g83910.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomB08g84090.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomC01g11150.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomC01g28080.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomC01g53280.mRNA1 Alkaloid 16OMT low borderline
Bca_GomC02g34070.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomC02g34150.mRNA1 Alkaloid 16OMT medium borderline
Bca_GomC03g23540.mRNA1 Alkaloid 16OMT medium borderline