PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
Bca_GomB01g70810.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB02g01110.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB02g18610.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB02g19140.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB02g19150.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB02g20510.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB02g25310.mRNA1 Alkaloid G8O/G8H low borderline
Bca_GomB02g32680.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB02g32980.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB04g07780.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB04g18410.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB04g20650.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB04g26620.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB04g34050.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB04g74560.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB05g52850.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB05g52870.mRNA1 Alkaloid G8O/G8H medium pass
Bca_GomB05g78150.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB06g54060.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB06g59580.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB06g75880.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB06g86660.mRNA1 Alkaloid G8O/G8H medium pass
Bca_GomB07g26720.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB07g41750.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB07g41850.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB07g44440.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB07g48490.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB07g56260.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB07g56270.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB07g56290.mRNA1 Alkaloid G8O/G8H low borderline
Bca_GomB07g67740.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB07g79990.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB08g01130.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB08g20220.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB08g52310.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB08g63720.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomB08g92910.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomC01g04100.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomC01g18320.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomC01g18890.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomC01g32850.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomC01g40570.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomC02g19030.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomC02g28090.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomC02g36160.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomC02g56420.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomC03g10550.mRNA1 Alkaloid G8O/G8H low borderline
Bca_GomC03g21460.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomC03g23580.mRNA1 Alkaloid G8O/G8H medium borderline
Bca_GomC03g46800.mRNA1 Alkaloid G8O/G8H low borderline