PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: AACT
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Gene Pathway Family Confidence Status
Bca_GomB01g12230.mRNA1 Terpenoid AACT medium borderline
Bca_GomB01g12290.mRNA1 Terpenoid AACT medium borderline
Bca_GomB02g10480.mRNA1 Terpenoid AACT low borderline
Bca_GomB02g71540.mRNA1 Terpenoid AACT medium borderline
Bca_GomB02g72400.mRNA1 Terpenoid AACT medium borderline
Bca_GomB02g72410.mRNA1 Terpenoid AACT medium pass
Bca_GomB03g03930.mRNA1 Terpenoid AACT medium borderline
Bca_GomB04g09820.mRNA1 Terpenoid AACT low borderline
Bca_GomB04g16820.mRNA1 Terpenoid AACT medium borderline
Bca_GomB04g23880.mRNA1 Terpenoid AACT medium borderline
Bca_GomB04g30450.mRNA1 Terpenoid AACT medium borderline
Bca_GomB06g37100.mRNA1 Terpenoid AACT medium borderline
Bca_GomB07g41060.mRNA1 Terpenoid AACT medium borderline
Bca_GomB08g27740.mRNA1 Terpenoid AACT medium borderline
Bca_GomC01g57870.mRNA1 Terpenoid AACT medium borderline
Bca_GomC02g53550.mRNA1 Terpenoid AACT medium borderline
Bca_GomC02g54020.mRNA1 Terpenoid AACT medium borderline
Bca_GomC03g51380.mRNA1 Terpenoid AACT low borderline
Bca_GomC04g01720.mRNA1 Terpenoid AACT medium borderline
Bca_GomC04g16370.mRNA1 Terpenoid AACT medium borderline
Bca_GomC04g54560.mRNA1 Terpenoid AACT medium borderline
Bca_GomC07g39540.mRNA1 Terpenoid AACT medium borderline
Bca_GomC08g04370.mRNA1 Terpenoid AACT medium borderline
Bca_GomC09g07400.mRNA1 Terpenoid AACT medium borderline
Bca_GomC09g22770.mRNA1 Terpenoid AACT medium borderline
Bca_GomC09g23040.mRNA1 Terpenoid AACT medium borderline