PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Bca_GomB01g01140.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB01g18250.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB01g28180.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB01g31520.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB01g43790.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB01g43970.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB01g44810.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB01g57910.mRNA2 Rosmarinic Acid 4CL low borderline
Bca_GomB01g57950.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB01g57970.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB01g57990.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB01g58040.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB01g64940.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB02g02300.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB02g104220.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB02g55640.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB02g57650.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB02g84400.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB02g85180.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB03g14000.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB03g14010.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g14020.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g33760.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB03g34090.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB03g38640.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g39240.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g39250.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g47470.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g47480.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g47490.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g55150.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g55350.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g55390.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g55470.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g55490.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g70110.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g79180.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g84670.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g84680.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g84690.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g85130.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g86130.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g86180.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g86190.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g93960.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB04g01940.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB04g01950.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB04g01960.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB04g05680.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB04g12080.mRNA1 Rosmarinic Acid 4CL low borderline