PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
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Gene Pathway Family Confidence Status
Bca_GomB01g05350.mRNA1 Flavonoid FNS low borderline
Bca_GomB01g15030.mRNA1 Flavonoid FNS medium borderline
Bca_GomB01g50160.mRNA1 Flavonoid FNS medium borderline
Bca_GomB01g61760.mRNA1 Flavonoid FNS medium borderline
Bca_GomB01g63520.mRNA1 Flavonoid FNS low borderline
Bca_GomB01g67410.mRNA1 Flavonoid FNS medium borderline
Bca_GomB02g01120.mRNA1 Flavonoid FNS medium borderline
Bca_GomB02g17320.mRNA1 Flavonoid FNS medium borderline
Bca_GomB02g19140.mRNA1 Flavonoid FNS medium borderline
Bca_GomB02g19150.mRNA1 Flavonoid FNS medium borderline
Bca_GomB02g22020.mRNA1 Flavonoid FNS low borderline
Bca_GomB02g32290.mRNA1 Flavonoid FNS low borderline
Bca_GomB02g32420.mRNA1 Flavonoid FNS low borderline
Bca_GomB02g46630.mRNA1 Flavonoid FNS medium borderline
Bca_GomB02g52650.mRNA1 Flavonoid FNS medium borderline
Bca_GomB02g77920.mRNA1 Flavonoid FNS low borderline
Bca_GomB02g96890.mRNA1 Flavonoid FNS medium borderline
Bca_GomB02g98860.mRNA1 Flavonoid FNS medium borderline
Bca_GomB02g99510.mRNA1 Flavonoid FNS medium borderline
Bca_GomB02g99560.mRNA1 Flavonoid FNS medium pass
Bca_GomB02g99570.mRNA1 Flavonoid FNS medium borderline
Bca_GomB03g08120.mRNA1 Flavonoid FNS medium borderline
Bca_GomB03g08490.mRNA1 Flavonoid FNS medium borderline
Bca_GomB03g21360.mRNA1 Flavonoid FNS medium borderline
Bca_GomB03g65140.mRNA1 Flavonoid FNS medium borderline
Bca_GomB03g88790.mRNA1 Flavonoid FNS medium borderline
Bca_GomB03g92350.mRNA1 Flavonoid FNS low borderline
Bca_GomB04g00500.mRNA1 Flavonoid FNS medium borderline
Bca_GomB04g23020.mRNA1 Flavonoid FNS medium borderline
Bca_GomB04g28480.mRNA1 Flavonoid FNS medium borderline
Bca_GomB04g44890.mRNA1 Flavonoid FNS medium borderline
Bca_GomB04g45270.mRNA1 Flavonoid FNS medium borderline
Bca_GomB05g44010.mRNA1 Flavonoid FNS medium borderline
Bca_GomB05g44020.mRNA1 Flavonoid FNS medium borderline
Bca_GomB05g52510.mRNA1 Flavonoid FNS low borderline
Bca_GomB05g74150.mRNA1 Flavonoid FNS medium borderline
Bca_GomB05g78150.mRNA1 Flavonoid FNS medium borderline
Bca_GomB06g00280.mRNA1 Flavonoid FNS medium borderline
Bca_GomB06g00300.mRNA1 Flavonoid FNS medium borderline
Bca_GomB06g00990.mRNA1 Flavonoid FNS medium borderline
Bca_GomB06g12660.mRNA1 Flavonoid FNS medium borderline
Bca_GomB06g13250.mRNA1 Flavonoid FNS medium borderline
Bca_GomB06g13610.mRNA1 Flavonoid FNS medium borderline
Bca_GomB06g13800.mRNA1 Flavonoid FNS medium borderline
Bca_GomB06g74040.mRNA1 Flavonoid FNS medium borderline
Bca_GomB07g02390.mRNA1 Flavonoid FNS medium borderline
Bca_GomB07g41750.mRNA1 Flavonoid FNS medium borderline
Bca_GomB07g41850.mRNA1 Flavonoid FNS medium borderline
Bca_GomB07g44440.mRNA1 Flavonoid FNS medium borderline
Bca_GomB07g56290.mRNA1 Flavonoid FNS medium borderline