PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPR
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Gene Pathway Family Confidence Status Best Target
Bca_GomB01g27260.mRNA1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Bca_GomB01g28120.mRNA1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Bca_GomB01g42060.mRNA1 Rosmarinic Acid CPR low borderline CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
Bca_GomB01g42340.mRNA1 Rosmarinic Acid CPR medium pass CPR__00004__sp_Q0J705_NCPR2_ORYSJ
Bca_GomB02g78440.mRNA1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Bca_GomB02g87970.mRNA1 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
Bca_GomB02g91860.mRNA1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Bca_GomB02g91870.mRNA1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Bca_GomB02g92900.mRNA1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Bca_GomB05g18810.mRNA1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Bca_GomB05g19530.mRNA1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Bca_GomB05g26220.mRNA1 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
Bca_GomB05g26230.mRNA1 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
Bca_GomB05g26620.mRNA1 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
Bca_GomB05g26640.mRNA1 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
Bca_GomB05g36410.mRNA1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Bca_GomB06g10840.mRNA1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Bca_GomB07g00260.mRNA1 Rosmarinic Acid CPR medium pass CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
Bca_GomB07g00510.mRNA1 Rosmarinic Acid CPR medium pass CPR__00004__sp_Q0J705_NCPR2_ORYSJ
Bca_GomB07g02890.mRNA1 Rosmarinic Acid CPR medium pass CPR__00003__sp_C5YJG8_NCPR_SORBI
Bca_GomB07g30920.mRNA1 Rosmarinic Acid CPR medium pass CPR__00003__sp_C5YJG8_NCPR_SORBI
Bca_GomB07g31680.mRNA1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Bca_GomB07g43720.mRNA1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Bca_GomB07g43810.mRNA1 Rosmarinic Acid CPR medium pass CPR__00004__sp_Q0J705_NCPR2_ORYSJ
Bca_GomB08g03230.mRNA1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Bca_GomB08g56550.mRNA1 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
Bca_GomB08g82440.mRNA1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Bca_GomC01g12520.mRNA1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Bca_GomC01g14040.mRNA1 Rosmarinic Acid CPR low borderline CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Bca_GomC01g23710.mRNA1 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
Bca_GomC01g23720.mRNA1 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
Bca_GomC01g32470.mRNA1 Rosmarinic Acid CPR low borderline CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Bca_GomC01g41380.mRNA1 Rosmarinic Acid CPR low borderline CPR__00008__sp_Q9SB48_NCPR1_ARATH
Bca_GomC02g59380.mRNA1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Bca_GomC03g34100.mRNA1 Rosmarinic Acid CPR low borderline CPR__00007__sp_Q96327_EBP1_ARATH
Bca_GomC03g45880.mRNA1 Rosmarinic Acid CPR low borderline CPR__00007__sp_Q96327_EBP1_ARATH
Bca_GomC03g89590.mRNA1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Bca_GomC03g89850.mRNA1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Bca_GomC04g29670.mRNA3 Rosmarinic Acid CPR low borderline CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
Bca_GomC04g33410.mRNA1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Bca_GomC05g43820.mRNA1 Rosmarinic Acid CPR medium pass CPR__00004__sp_Q0J705_NCPR2_ORYSJ
Bca_GomC05g43910.mRNA1 Rosmarinic Acid CPR low borderline CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
Bca_GomC07g16160.mRNA1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Bca_GomC07g29810.mRNA1 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
Bca_GomC07g46780.mRNA1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Bca_GomC07g54640.mRNA1 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
Bca_GomC08g33780.mRNA1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Bca_GomC09g13610.mRNA1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI