PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

/

Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
Reset
Gene Pathway Family Confidence Status
Bca_GomB01g50490.mRNA1 Alkaloid NCS medium pass
Bca_GomB02g15410.mRNA1 Alkaloid NCS medium borderline
Bca_GomB02g16450.mRNA1 Alkaloid NCS medium borderline
Bca_GomB02g73580.mRNA1 Alkaloid NCS medium borderline
Bca_GomB03g30090.mRNA2 Alkaloid NCS medium borderline
Bca_GomB03g46020.mRNA1 Alkaloid NCS medium borderline
Bca_GomB03g50510.mRNA1 Alkaloid NCS medium borderline
Bca_GomB03g70200.mRNA1 Alkaloid NCS medium borderline
Bca_GomB05g34310.mRNA2 Alkaloid NCS medium borderline
Bca_GomB05g53900.mRNA1 Alkaloid NCS medium borderline
Bca_GomB05g68400.mRNA1 Alkaloid NCS medium borderline
Bca_GomB06g27320.mRNA1 Alkaloid NCS medium borderline
Bca_GomB06g39450.mRNA1 Alkaloid NCS medium borderline
Bca_GomB06g57660.mRNA1 Alkaloid NCS medium borderline
Bca_GomB06g59110.mRNA1 Alkaloid NCS medium borderline
Bca_GomB06g60020.mRNA1 Alkaloid NCS medium borderline
Bca_GomB07g00310.mRNA1 Alkaloid NCS medium borderline
Bca_GomB07g03370.mRNA1 Alkaloid NCS medium borderline
Bca_GomB07g04000.mRNA1 Alkaloid NCS medium borderline
Bca_GomB07g81310.mRNA1 Alkaloid NCS medium borderline
Bca_GomB08g01040.mRNA1 Alkaloid NCS medium borderline
Bca_GomB08g78580.mRNA1 Alkaloid NCS medium borderline
Bca_GomC01g19370.mRNA1 Alkaloid NCS medium borderline
Bca_GomC01g34000.mRNA1 Alkaloid NCS medium borderline
Bca_GomC02g17560.mRNA1 Alkaloid NCS medium borderline
Bca_GomC02g17590.mRNA1 Alkaloid NCS medium borderline
Bca_GomC03g53740.mRNA1 Alkaloid NCS medium borderline
Bca_GomC03g69390.mRNA1 Alkaloid NCS medium borderline
Bca_GomC03g91300.mRNA1 Alkaloid NCS medium borderline
Bca_GomC04g04210.mRNA1 Alkaloid NCS medium borderline
Bca_GomC04g14990.mRNA1 Alkaloid NCS medium borderline
Bca_GomC05g03440.mRNA1 Alkaloid NCS medium borderline
Bca_GomC05g03490.mRNA1 Alkaloid NCS medium borderline
Bca_GomC05g08000.mRNA1 Alkaloid NCS medium borderline
Bca_GomC05g19460.mRNA1 Alkaloid NCS medium pass
Bca_GomC05g36280.mRNA1 Alkaloid NCS low borderline
Bca_GomC05g38530.mRNA1 Alkaloid NCS medium borderline
Bca_GomC06g00960.mRNA1 Alkaloid NCS medium borderline
Bca_GomC08g52230.mRNA1 Alkaloid NCS medium borderline
Bca_GomC08g52570.mRNA1 Alkaloid NCS medium borderline