PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

/

Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
Reset
Gene Pathway Family Confidence Status
Bca_GomB01g18820.mRNA1 Alkaloid GES medium pass
Bca_GomB01g18830.mRNA1 Alkaloid GES medium pass
Bca_GomB01g18850.mRNA1 Alkaloid GES medium pass
Bca_GomB02g56460.mRNA1 Alkaloid GES medium pass
Bca_GomB02g58280.mRNA1 Alkaloid GES medium pass
Bca_GomB02g67280.mRNA1 Alkaloid GES medium pass
Bca_GomB02g67290.mRNA1 Alkaloid GES medium pass
Bca_GomB02g67340.mRNA1 Alkaloid GES medium pass
Bca_GomB02g74080.mRNA1 Alkaloid GES medium pass
Bca_GomB02g76260.mRNA1 Alkaloid GES medium pass
Bca_GomB02g77130.mRNA2 Alkaloid GES low borderline
Bca_GomB02g77690.mRNA1 Alkaloid GES low borderline
Bca_GomB02g98160.mRNA1 Alkaloid GES low borderline
Bca_GomB02g98180.mRNA1 Alkaloid GES low borderline
Bca_GomB03g30420.mRNA1 Alkaloid GES medium pass
Bca_GomB03g31450.mRNA1 Alkaloid GES low borderline
Bca_GomB03g98210.mRNA1 Alkaloid GES medium pass
Bca_GomB04g20790.mRNA1 Alkaloid GES medium pass
Bca_GomB04g26430.mRNA1 Alkaloid GES low borderline
Bca_GomB04g26570.mRNA1 Alkaloid GES low borderline
Bca_GomB04g31640.mRNA1 Alkaloid GES medium pass
Bca_GomB04g36300.mRNA1 Alkaloid GES medium pass
Bca_GomB05g12010.mRNA1 Alkaloid GES low borderline
Bca_GomB05g31090.mRNA1 Alkaloid GES medium pass
Bca_GomB05g31670.mRNA1 Alkaloid GES medium pass
Bca_GomB05g33950.mRNA1 Alkaloid GES medium pass
Bca_GomB05g34370.mRNA1 Alkaloid GES medium pass
Bca_GomB05g50980.mRNA1 Alkaloid GES medium pass
Bca_GomB06g33980.mRNA1 Alkaloid GES low borderline
Bca_GomB06g69970.mRNA1 Alkaloid GES low borderline
Bca_GomB06g82840.mRNA1 Alkaloid GES low borderline
Bca_GomB06g82900.mRNA1 Alkaloid GES low borderline
Bca_GomB06g82980.mRNA1 Alkaloid GES medium pass
Bca_GomB07g05850.mRNA1 Alkaloid GES low borderline
Bca_GomB07g19080.mRNA2 Alkaloid GES medium pass
Bca_GomB07g19090.mRNA1 Alkaloid GES low borderline
Bca_GomB07g19230.mRNA1 Alkaloid GES low borderline
Bca_GomB07g52200.mRNA1 Alkaloid GES medium pass
Bca_GomB07g52220.mRNA1 Alkaloid GES medium pass
Bca_GomB07g52520.mRNA1 Alkaloid GES medium pass
Bca_GomB07g52530.mRNA1 Alkaloid GES medium pass
Bca_GomB07g60030.mRNA1 Alkaloid GES low borderline
Bca_GomB08g44960.mRNA1 Alkaloid GES medium pass
Bca_GomB08g48330.mRNA1 Alkaloid GES medium pass
Bca_GomB08g51170.mRNA1 Alkaloid GES medium pass
Bca_GomB08g59280.mRNA1 Alkaloid GES low borderline
Bca_GomC01g03420.mRNA1 Alkaloid GES low borderline
Bca_GomC01g03790.mRNA1 Alkaloid GES low borderline
Bca_GomC01g18330.mRNA1 Alkaloid GES medium pass
Bca_GomC01g18900.mRNA1 Alkaloid GES medium pass