PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SMO1/SMO2
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Gene Pathway Family Confidence Status Best Target
Bca_GomB01g15680.mRNA1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00004__sp_Q9ZW22_SMO21_ARATH
Bca_GomB01g16740.mRNA1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00004__sp_Q9ZW22_SMO21_ARATH
Bca_GomB02g04720.mRNA1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00003__sp_Q8VWZ8_SMO22_ARATH
Bca_GomB02g20190.mRNA1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00001__sp_Q1EC69_SMO12_ARATH
Bca_GomB02g86330.mRNA1 Steroid SMO1/SMO2 low borderline SMO1_SMO2__00001__sp_Q1EC69_SMO12_ARATH
Bca_GomB03g05080.mRNA1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00003__sp_Q8VWZ8_SMO22_ARATH
Bca_GomB05g28890.mRNA1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00001__sp_Q1EC69_SMO12_ARATH
Bca_GomB05g28910.mRNA1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00002__sp_Q8L7W5_SMO11_ARATH
Bca_GomB05g29070.mRNA1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00002__sp_Q8L7W5_SMO11_ARATH
Bca_GomB05g29090.mRNA1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00001__sp_Q1EC69_SMO12_ARATH
Bca_GomB05g70470.mRNA1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00002__sp_Q8L7W5_SMO11_ARATH
Bca_GomB06g02970.mRNA1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00003__sp_Q8VWZ8_SMO22_ARATH
Bca_GomB06g57000.mRNA1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00003__sp_Q8VWZ8_SMO22_ARATH
Bca_GomC01g20910.mRNA1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00002__sp_Q8L7W5_SMO11_ARATH
Bca_GomC01g21140.mRNA1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00001__sp_Q1EC69_SMO12_ARATH
Bca_GomC02g28790.mRNA1 Steroid SMO1/SMO2 low borderline SMO1_SMO2__00001__sp_Q1EC69_SMO12_ARATH
Bca_GomC04g51670.mRNA1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00004__sp_Q9ZW22_SMO21_ARATH
Bca_GomC05g08580.mRNA1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00003__sp_Q8VWZ8_SMO22_ARATH
Bca_GomC06g03360.mRNA1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00002__sp_Q8L7W5_SMO11_ARATH
Bca_GomC07g52710.mRNA1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00001__sp_Q1EC69_SMO12_ARATH
Bca_GomC07g53020.mRNA1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00001__sp_Q1EC69_SMO12_ARATH
Bca_GomC08g05710.mRNA1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00003__sp_Q8VWZ8_SMO22_ARATH