PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

/

Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F5H/CYP84A
Reset
Gene Pathway Family Confidence Status
Bca_GomB01g41800.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB01g41830.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB02g10080.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB02g18610.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB02g20570.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB02g29930.mRNA1 Phenylpropanoid F5H/CYP84A low borderline
Bca_GomB02g74100.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB02g77120.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB02g96880.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB02g96890.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB02g99550.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB02g99560.mRNA1 Phenylpropanoid F5H/CYP84A medium pass
Bca_GomB03g31200.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB03g49990.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB03g65260.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB03g88790.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB04g20530.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB04g20800.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB04g28480.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB04g44890.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB04g45270.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB04g60270.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB04g68620.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB04g74570.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB05g02330.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB05g35270.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB05g64060.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB05g64240.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB05g64320.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB06g54060.mRNA1 Phenylpropanoid F5H/CYP84A medium pass
Bca_GomB06g54920.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB06g86670.mRNA2 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB07g24120.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB07g39340.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB07g48490.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB07g56260.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB07g56270.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB07g73660.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB07g79990.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB08g50850.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomC01g32760.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomC01g32800.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomC01g43740.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomC02g56750.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomC03g39680.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomC03g42550.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomC03g54390.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomC03g54420.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomC03g58360.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomC03g59830.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline