PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

/

Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
Reset
Gene Pathway Family Confidence Status
Bca_GomB01g10940.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomB01g15920.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomB01g61760.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomB01g78130.mRNA1 Steroid BR6OX1/CYP85A1 low borderline
Bca_GomB02g10080.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomB02g19580.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomB02g61750.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomB02g82310.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomB02g83380.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomB03g28560.mRNA1 Steroid BR6OX1/CYP85A1 low borderline
Bca_GomB03g64770.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomB04g26610.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomB04g26630.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomB04g34550.mRNA1 Steroid BR6OX1/CYP85A1 low borderline
Bca_GomB04g75850.mRNA1 Steroid BR6OX1/CYP85A1 low borderline
Bca_GomB05g35590.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomB05g35600.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomB05g35610.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomB05g35650.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomB05g55440.mRNA3 Steroid BR6OX1/CYP85A1 low borderline
Bca_GomB06g34710.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomB08g25510.mRNA1 Steroid BR6OX1/CYP85A1 low borderline
Bca_GomB08g27580.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC01g36130.mRNA1 Steroid BR6OX1/CYP85A1 low borderline
Bca_GomC01g57700.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC03g36530.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC03g38290.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC03g42480.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC03g50040.mRNA1 Steroid BR6OX1/CYP85A1 low borderline
Bca_GomC03g58360.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC03g71750.mRNA1 Steroid BR6OX1/CYP85A1 low borderline
Bca_GomC04g04700.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC04g21610.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC04g30180.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC04g51260.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC04g51300.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC04g51310.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC07g17240.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC07g17260.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC07g28480.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC07g42440.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC07g42590.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC07g50630.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC07g50890.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC08g29030.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC08g29100.mRNA1 Steroid BR6OX1/CYP85A1 medium borderline
Bca_GomC08g50460.mRNA1 Steroid BR6OX1/CYP85A1 low borderline
Bca_GomB01g02250.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB01g07490.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB01g15030.mRNA1 Steroid BR6OX2/CYP85A2 low borderline