PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
Bca_GomB01g02250.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB01g07490.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB01g15030.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB01g15040.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB01g29780.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB01g30690.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB01g41810.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB01g41830.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB01g48040.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB01g48110.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB01g67410.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB01g70810.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB01g76560.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB02g08110.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB02g08580.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB02g19100.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB02g20570.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB02g47190.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB02g51120.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB02g51130.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB02g52650.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB02g53340.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB02g60920.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB02g61760.mRNA1 Steroid BR6OX2/CYP85A2 medium borderline
Bca_GomB02g67470.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB02g67500.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB02g67510.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB02g67770.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB02g67780.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB02g77120.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB02g98780.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB02g98800.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB02g98810.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB02g98840.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB03g08080.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB03g08450.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB03g11100.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB03g11500.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB03g20610.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB03g20630.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB03g21350.mRNA2 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB03g21360.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB03g36560.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB03g36570.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB03g49760.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB03g49990.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB03g50050.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB03g65260.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB03g67190.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB03g88040.mRNA1 Steroid BR6OX2/CYP85A2 low borderline