PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status Best Target
Bca_GomB01g00780.mRNA1 Terpenoid CYP76 medium borderline CYP76__00014__sp_I3PFJ5_C76AD_BETVU
Bca_GomB01g02180.mRNA1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomB01g02250.mRNA1 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB01g03970.mRNA1 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB01g03990.mRNA1 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB01g04000.mRNA1 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB01g07370.mRNA1 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB01g07380.mRNA1 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB01g07490.mRNA1 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomB01g07500.mRNA1 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB01g10940.mRNA1 Terpenoid CYP76 low borderline CYP76__00024__sp_W0FKI0_DOX1_PERHD
Bca_GomB01g15030.mRNA1 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB01g15040.mRNA1 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Bca_GomB01g23080.mRNA1 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB01g23470.mRNA1 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB01g30690.mRNA1 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Bca_GomB01g41800.mRNA1 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomB01g41810.mRNA1 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomB01g41830.mRNA1 Terpenoid CYP76 medium borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomB01g53780.mRNA1 Terpenoid CYP76 low borderline CYP76__00006__sp_A0A1D8QMD1_C76K6_SALFT
Bca_GomB01g67380.mRNA1 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Bca_GomB01g67390.mRNA1 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB01g67410.mRNA1 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB01g70580.mRNA1 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB01g70810.mRNA1 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomB01g72530.mRNA1 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomB01g76560.mRNA1 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB01g77410.mRNA1 Terpenoid CYP76 low borderline CYP76__00017__sp_Q14T82_C76B9_PETHY
Bca_GomB01g77440.mRNA1 Terpenoid CYP76 low borderline CYP76__00017__sp_Q14T82_C76B9_PETHY
Bca_GomB02g01110.mRNA1 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomB02g01120.mRNA1 Terpenoid CYP76 medium pass CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomB02g02020.mRNA1 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB02g07800.mRNA1 Terpenoid CYP76 low borderline CYP76__00017__sp_Q14T82_C76B9_PETHY
Bca_GomB02g08110.mRNA1 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB02g08580.mRNA1 Terpenoid CYP76 medium borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
Bca_GomB02g10080.mRNA1 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB02g102050.mRNA1 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomB02g102060.mRNA1 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomB02g11170.mRNA1 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomB02g11750.mRNA1 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomB02g14230.mRNA1 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomB02g18610.mRNA1 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomB02g19140.mRNA1 Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU
Bca_GomB02g19150.mRNA1 Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU
Bca_GomB02g20570.mRNA1 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomB02g32680.mRNA1 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomB02g32980.mRNA1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomB02g44330.mRNA1 Terpenoid CYP76 low borderline CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
Bca_GomB02g46630.mRNA1 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomB02g47190.mRNA1 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI